Standard name | |
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Human Ortholog | |
Description | GTP-binding protein; regulates nitrogen starvation response, sporulation, and filamentous growth; farnesylation and palmitoylation required for activity and localization to plasma membrane; homolog of mammalian Ras proto-oncogenes; RAS2 has a paralog, RAS1, that arose from the whole genome duplication |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 2 | – | 2 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 |
Bud | 0 | 0 | 0 | 0 | 1 | 3 | 4 | 8 | – | 3 | 0 | 5 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 0 | 0 | 0 | 4 | 4 | 12 | 5 | 18 | – | 14 | 5 | 9 | 0 | 5 | 2 | 6 | 1 | 4 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 89 | 114 | 76 | 201 | 295 | 326 | 338 | 478 | – | 261 | 199 | 227 | 127 | 282 | 266 | 284 | 232 | 172 | 85 | 92 | 72 | 100 | 152 | 205 |
Endoplasmic Reticulum | 0 | 1 | 1 | 2 | 1 | 4 | 6 | 11 | – | 5 | 5 | 2 | 2 | 2 | 1 | 10 | 9 | 5 | 0 | 1 | 3 | 3 | 4 | 2 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | – | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 9 | – | 4 | 0 | 2 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 0 | 0 | 2 | 1 | 0 | 3 | 2 | 0 | – | 3 | 4 | 10 | 0 | 0 | 0 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 2 |
Nucleus | 0 | 0 | 0 | 0 | 2 | 2 | 1 | 0 | – | 0 | 2 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 1 | 2 | 1 | 3 | 6 | 3 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vac/Vac Membrane | 1 | 0 | 0 | 0 | 1 | 4 | 12 | 27 | – | 9 | 3 | 4 | 2 | 2 | 1 | 1 | 3 | 2 | 0 | 3 | 1 | 6 | 8 | 4 |
Unique Cell Count | 90 | 115 | 78 | 203 | 298 | 345 | 360 | 530 | 286 | 215 | 251 | 131 | 287 | 268 | 289 | 234 | 175 | 92 | 105 | 87 | 119 | 186 | 230 | |
Labelled Cell Count | 90 | 115 | 79 | 208 | 304 | 357 | 369 | 554 | 301 | 218 | 262 | 133 | 292 | 270 | 304 | 247 | 183 | 92 | 105 | 87 | 119 | 186 | 230 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 40.9 | 45.5 | 29.5 | 30.5 | 27.8 | 28.0 | 26.7 | 31.6 | – | 30.9 | 28.9 | 28.0 | 31.7 | 38.7 | 41.3 | 30.0 | 29.9 | 30.8 | 43.7 | 41.8 | 42.9 |
Std Deviation (1e-4) | 11.2 | 13.6 | 12.9 | 10.9 | 9.5 | 8.5 | 9.6 | 10.1 | – | 10.1 | 11.1 | 10.0 | 9.4 | 10.7 | 11.7 | 8.8 | 8.8 | 9.3 | 13.5 | 15.1 | 13.6 |
Intensity Change (Log2) | – | – | – | 0.05 | -0.08 | -0.07 | -0.14 | 0.1 | – | 0.07 | -0.03 | -0.07 | 0.1 | 0.39 | 0.48 | 0.03 | 0.02 | 0.06 | 0.57 | 0.5 | 0.54 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 1.0 | 1.1 | -1.1 | -1.2 | -2.1 | – | -1.8 | -1.5 | -2.0 | -0.2 | 0.5 | 1.3 | 0.5 | 1.2 | 0.4 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleus | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 32.7859 | 40.1869 | 36.2268 | 35.1495 | 28.5061 | 37.4532 | 38.2441 | 36.4184 | 38.95 | 38.5511 | 36.051 | 39.2925 | 35.7505 | 36.9085 | 35.0537 | 32.851 | 30.0729 | 40.3966 |
Actin | 0.0073 | 0.0025 | 0.0136 | 0.0001 | 0.0003 | 0.0001 | 0.0048 | 0.0008 | 0.0034 | 0 | 0.0009 | 0.0012 | 0.0019 | 0.0002 | 0.006 | 0.054 | 0.0323 | 0.0001 |
Bud | 0.0005 | 0.0001 | 0.0009 | 0 | 0.0001 | 0.0001 | 0.0011 | 0 | 0.0004 | 0 | 0.0004 | 0.0001 | 0.0003 | 0 | 0.0001 | 0.0002 | 0.0006 | 0 |
Bud Neck | 0.0008 | 0.0002 | 0.0005 | 0.0003 | 0.0004 | 0.0004 | 0.0004 | 0.0001 | 0.0002 | 0.0001 | 0.0003 | 0.0006 | 0.0001 | 0.0001 | 0.0004 | 0.0004 | 0.0005 | 0.0004 |
Bud Periphery | 0.0006 | 0.0001 | 0.0003 | 0 | 0 | 0 | 0.0006 | 0 | 0.0005 | 0 | 0.0006 | 0.0001 | 0.0001 | 0 | 0.0001 | 0.0002 | 0.0009 | 0 |
Bud Site | 0.0013 | 0.0002 | 0.0035 | 0 | 0.0001 | 0 | 0.0012 | 0.0001 | 0.0003 | 0 | 0.0003 | 0.0001 | 0.0002 | 0 | 0.0012 | 0.0005 | 0.0031 | 0 |
Cell Periphery | 0.0003 | 0 | 0.0001 | 0 | 0 | 0 | 0.0002 | 0 | 0.0002 | 0 | 0.0003 | 0.0001 | 0 | 0 | 0.0001 | 0 | 0.0002 | 0 |
Cytoplasm | 0.8836 | 0.986 | 0.9516 | 0.9885 | 0.9083 | 0.985 | 0.9313 | 0.9788 | 0.9624 | 0.9901 | 0.9008 | 0.9584 | 0.9405 | 0.9935 | 0.9554 | 0.9322 | 0.8392 | 0.9842 |
Cytoplasmic Foci | 0.0197 | 0.0013 | 0.0094 | 0.0003 | 0.0153 | 0.0006 | 0.0128 | 0.0029 | 0.003 | 0.0002 | 0.0033 | 0.0034 | 0.0076 | 0.0004 | 0.0077 | 0.0005 | 0.0042 | 0.0002 |
Eisosomes | 0.0001 | 0 | 0.0001 | 0 | 0 | 0 | 0.0001 | 0 | 0 | 0 | 0.0002 | 0 | 0 | 0 | 0.0001 | 0.0003 | 0.0004 | 0 |
Endoplasmic Reticulum | 0.0092 | 0.0004 | 0.0004 | 0.0001 | 0.0007 | 0.0002 | 0.0021 | 0.0003 | 0.0007 | 0.0002 | 0.0016 | 0.0034 | 0.0011 | 0.0003 | 0.0009 | 0.0003 | 0.0088 | 0.0001 |
Endosome | 0.0159 | 0.0005 | 0.0017 | 0 | 0.033 | 0.0002 | 0.0064 | 0.0005 | 0.0017 | 0.0001 | 0.005 | 0.0031 | 0.0047 | 0.0001 | 0.0025 | 0.0006 | 0.0148 | 0 |
Golgi | 0.0042 | 0.0004 | 0.0018 | 0 | 0.0244 | 0 | 0.0014 | 0.0007 | 0.0006 | 0 | 0.0009 | 0.001 | 0.0011 | 0 | 0.0013 | 0.0014 | 0.0077 | 0 |
Lipid Particles | 0.0076 | 0.0011 | 0.0005 | 0 | 0.0024 | 0 | 0.0055 | 0.0013 | 0.0017 | 0 | 0.0027 | 0.0013 | 0.0058 | 0 | 0.0041 | 0.0003 | 0.0086 | 0 |
Mitochondria | 0.0029 | 0.0007 | 0.0017 | 0 | 0.0006 | 0.0001 | 0.0023 | 0.0001 | 0.0066 | 0 | 0.0584 | 0.0014 | 0.0014 | 0 | 0.0032 | 0.0005 | 0.0282 | 0 |
None | 0.0101 | 0.0003 | 0.0019 | 0.0001 | 0.0003 | 0.0002 | 0.0028 | 0.0001 | 0.0007 | 0.0001 | 0.0035 | 0.0006 | 0.002 | 0.0002 | 0.0023 | 0.0002 | 0.0015 | 0.0001 |
Nuclear Periphery | 0.0078 | 0.0007 | 0.001 | 0.001 | 0.0018 | 0.0013 | 0.0045 | 0.0026 | 0.0019 | 0.0016 | 0.0027 | 0.0068 | 0.0055 | 0.001 | 0.0024 | 0.0012 | 0.0213 | 0.0013 |
Nucleolus | 0.0003 | 0.0002 | 0.0006 | 0 | 0 | 0 | 0.0003 | 0 | 0.0005 | 0 | 0.0004 | 0.0014 | 0.0001 | 0 | 0.001 | 0 | 0.0005 | 0 |
Nucleus | 0.0194 | 0.0048 | 0.0061 | 0.0093 | 0.007 | 0.0114 | 0.0136 | 0.0081 | 0.0077 | 0.0071 | 0.0071 | 0.0115 | 0.0187 | 0.0038 | 0.0072 | 0.0064 | 0.018 | 0.0131 |
Peroxisomes | 0.0015 | 0.0001 | 0.001 | 0 | 0.0011 | 0 | 0.0015 | 0.0028 | 0.0008 | 0 | 0.0012 | 0.0004 | 0.0058 | 0 | 0.0006 | 0.0002 | 0.002 | 0 |
Punctate Nuclear | 0.0031 | 0.0002 | 0.0015 | 0.0002 | 0.0003 | 0.0002 | 0.0024 | 0.0003 | 0.0004 | 0.0001 | 0.0002 | 0.0017 | 0.0013 | 0.0001 | 0.0017 | 0.0002 | 0.0026 | 0.0001 |
Vacuole | 0.0028 | 0.0002 | 0.0015 | 0.0001 | 0.0035 | 0.0002 | 0.0039 | 0.0003 | 0.0039 | 0.0002 | 0.0054 | 0.002 | 0.0009 | 0.0001 | 0.0008 | 0.0002 | 0.0017 | 0.0001 |
Vacuole Periphery | 0.0011 | 0.0001 | 0.0003 | 0 | 0.0005 | 0.0001 | 0.0012 | 0.0001 | 0.0024 | 0.0001 | 0.0039 | 0.0016 | 0.0009 | 0 | 0.0007 | 0.0001 | 0.0029 | 0.0001 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 77.4319 | 76.3449 | 96.6847 | 120.9727 | 98.9175 | 70.5606 | 79.7653 | 109.0618 | 135.6151 | 103.401 |
Translational Efficiency | 1.8047 | 1.5128 | 1.3852 | 1.437 | 1.3844 | 2.0584 | 1.6874 | 1.4355 | 1.4563 | 1.4599 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✔ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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