Standard name | |
---|---|
Human Ortholog | |
Description | Putative protein of unknown function; GFP-fusion protein is induced in response to the DNA-damaging agent MMS; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies |
ensLOC | DeepLoc | |||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 2 | 0 | 4 | 8 | 4 | 0 | 5 | 6 | 1 | 2 | 2 | 3 | – | 1 | 1 | 0 | 0 | 0 | 0 | 3 | 3 | 0 | 3 | 3 |
Bud | 0 | 2 | 6 | 5 | 3 | 3 | 18 | 9 | 9 | 6 | 5 | 14 | – | 2 | 0 | 0 | 1 | 1 | 0 | 1 | 1 | 0 | 1 | 1 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 3 | 0 | 0 | 1 | – | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 2 | 4 | 9 | 6 | 6 | 4 | 5 | 5 | 3 | 4 | 1 | 2 | – | 3 | 7 | 2 | 2 | 4 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 0 | 6 | 1 | 6 | 6 | 4 | 6 | 7 | 7 | 5 | 6 | 1 | – | 5 | 3 | 4 | 0 | 3 | 0 | 1 | 0 | 0 | 2 | 0 |
Endoplasmic Reticulum | 0 | 3 | 1 | 1 | 3 | 0 | 2 | 2 | 1 | 4 | 0 | 5 | – | 1 | 2 | 0 | 1 | 1 | 0 | 1 | 0 | 1 | 0 | 0 |
Endosome | 6 | 1 | 13 | 6 | 30 | 8 | 17 | 22 | 10 | 6 | 2 | 5 | – | 5 | 7 | 2 | 2 | 2 | 3 | 5 | 7 | 2 | 3 | 0 |
Golgi | 13 | 7 | 68 | 43 | 106 | 26 | 28 | 46 | 8 | 12 | 4 | 13 | – | 36 | 35 | 0 | 4 | 9 | 4 | 12 | 10 | 4 | 11 | 11 |
Mitochondria | 101 | 173 | 210 | 305 | 318 | 344 | 448 | 401 | 483 | 543 | 339 | 530 | – | 94 | 100 | 1 | 1 | 2 | 103 | 149 | 261 | 28 | 89 | 87 |
Nucleus | 1 | 2 | 0 | 0 | 2 | 3 | 4 | 2 | 3 | 2 | 0 | 0 | – | 1 | 0 | 0 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 4 | 5 | 17 | 10 | 24 | 32 | 50 | 43 | 54 | 60 | 45 | 42 | – | 8 | 2 | 2 | 0 | 3 | 1 | 1 | 0 | 0 | 1 | 0 |
Nucleolus | 2 | 2 | 2 | 12 | 26 | 38 | 81 | 54 | 57 | 56 | 54 | 62 | – | 6 | 1 | 0 | 1 | 2 | 0 | 1 | 0 | 1 | 0 | 2 |
Peroxisomes | 1 | 1 | 11 | 13 | 8 | 6 | 10 | 10 | 4 | 10 | 0 | 8 | – | 8 | 7 | 4 | 5 | 3 | 4 | 3 | 20 | 2 | 5 | 6 |
SpindlePole | 0 | 0 | 8 | 8 | 3 | 4 | 8 | 8 | 1 | 7 | 3 | 7 | – | 1 | 2 | 2 | 1 | 2 | 0 | 1 | 0 | 0 | 0 | 0 |
Vac/Vac Membrane | 18 | 31 | 24 | 12 | 57 | 34 | 47 | 59 | 24 | 21 | 14 | 23 | – | 15 | 14 | 2 | 4 | 10 | 1 | 10 | 0 | 0 | 4 | 4 |
Unique Cell Count | 111 | 189 | 264 | 334 | 441 | 417 | 592 | 545 | 547 | 611 | 382 | 591 | 124 | 128 | 16 | 18 | 40 | 121 | 194 | 309 | 44 | 126 | 122 | |
Labelled Cell Count | 150 | 237 | 374 | 435 | 596 | 506 | 730 | 676 | 668 | 738 | 475 | 716 | 186 | 181 | 19 | 23 | 44 | 121 | 194 | 309 | 44 | 126 | 122 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 7.4 | 7.0 | 9.0 | 9.3 | 11.7 | 11.5 | 12.1 | 12.8 | 11.9 | 12.4 | 11.4 | 12.7 | – | 9.8 | 8.9 | 6.2 | 8.9 | 8.9 | – | 11.2 | 12.1 |
Std Deviation (1e-4) | 1.3 | 1.7 | 1.7 | 1.8 | 2.3 | 2.5 | 2.9 | 2.6 | 3.0 | 3.2 | 2.8 | 3.1 | – | 2.1 | 2.2 | 1.2 | 2.8 | 2.2 | – | 2.3 | 3.1 |
Intensity Change (Log2) | – | – | – | 0.04 | 0.38 | 0.35 | 0.42 | 0.51 | 0.4 | 0.46 | 0.34 | 0.5 | – | 0.12 | -0.02 | -0.55 | -0.01 | -0.02 | – | 0.31 | 0.42 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0.8 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0.6 | 0 | 0 | 0 | 0 | 0.1 | – | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | -1.3 | -1.8 | -2.3 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 1.0 | 0 | 0 | 0 |
Cytoplasm | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 |
Endosome | -2.2 | 1.0 | -2.2 | -1.5 | -0.6 | -2.5 | -3.7 | -3.7 | -3.8 | – | -0.4 | 0.2 | 0 | 0 | 0 |
Golgi | -4.0 | -0.5 | -7.2 | -9.0 | -6.6 | -11.1 | -11.2 | -9.8 | -10.9 | – | 0.7 | 0.3 | 0 | 0 | -0.4 |
Mitochondria | 4.1 | -2.2 | 1.0 | -1.2 | -1.9 | 3.3 | 3.7 | 3.2 | 4.0 | – | -0.8 | -0.3 | -6.6 | -7.0 | -9.6 |
Nucleus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | -2.0 | -0.5 | 0.6 | 1.0 | 0.7 | 1.6 | 1.6 | 2.3 | 0.4 | – | 0 | -2.1 | 0 | 0 | 0 |
Nucleolus | 2.3 | 3.4 | 4.5 | 5.9 | 4.8 | 5.0 | 4.6 | 5.9 | 5.0 | – | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | -0.2 | -1.9 | -2.2 | -2.2 | -2.0 | 0 | -2.2 | 0 | -2.6 | – | 1.0 | 0.6 | 0 | 0 | 0 |
SpindlePole | -0.5 | 0 | 0 | 0 | -1.5 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 |
Vacuole | -2.8 | 1.5 | -0.4 | -0.6 | 0.8 | -2.7 | -3.5 | -2.9 | -3.1 | – | 0.9 | 0.6 | 0 | 0 | 0 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 5.0877 | 5.9345 | 5.256 | 5.0568 | 4.6772 | 5.1511 | 6.7177 | 7.5789 | 7.3747 | 7.1757 | 5.584 | 7.4183 | 5.0218 | 5.666 | 5.1287 | 5.3303 | 5.4765 | 5.7252 |
Actin | 0.016 | 0.0104 | 0.0134 | 0.0363 | 0.0002 | 0.001 | 0.0303 | 0.0802 | 0.0202 | 0.0001 | 0.0052 | 0.0008 | 0.0415 | 0.0094 | 0.0217 | 0.0007 | 0.0236 | 0.002 |
Bud | 0.0002 | 0.0006 | 0.0001 | 0.0017 | 0 | 0 | 0.001 | 0.0014 | 0.0007 | 0.0001 | 0.0004 | 0 | 0.0006 | 0.0002 | 0.0009 | 0.0002 | 0.0002 | 0.0001 |
Bud Neck | 0.0003 | 0.0003 | 0 | 0.0012 | 0 | 0 | 0.005 | 0.0003 | 0.0002 | 0 | 0 | 0 | 0.0004 | 0.0001 | 0.0014 | 0 | 0.0001 | 0 |
Bud Periphery | 0.0003 | 0.0009 | 0.0002 | 0.0058 | 0 | 0.0001 | 0.0033 | 0.0045 | 0.0021 | 0.0005 | 0.0009 | 0.0001 | 0.0011 | 0.0003 | 0.001 | 0.0008 | 0.0003 | 0.0003 |
Bud Site | 0.0005 | 0.0018 | 0.0006 | 0.0066 | 0 | 0 | 0.0085 | 0.0025 | 0.0015 | 0 | 0.0003 | 0 | 0.0049 | 0.0004 | 0.0102 | 0.0002 | 0.0011 | 0.0001 |
Cell Periphery | 0.0002 | 0.0002 | 0.0001 | 0.0003 | 0 | 0 | 0.0003 | 0.0002 | 0.0004 | 0.0002 | 0.0001 | 0.0002 | 0.0005 | 0.0001 | 0.0003 | 0.0001 | 0.0001 | 0.0001 |
Cytoplasm | 0.0005 | 0.0001 | 0 | 0.0013 | 0 | 0.0002 | 0.0009 | 0.0003 | 0.0003 | 0 | 0 | 0 | 0.0003 | 0.0001 | 0.0005 | 0 | 0 | 0 |
Cytoplasmic Foci | 0.0055 | 0.0058 | 0.0025 | 0.0032 | 0.0001 | 0.0012 | 0.0177 | 0.0032 | 0.0031 | 0.0002 | 0.0021 | 0.0013 | 0.0053 | 0.0046 | 0.0238 | 0.0002 | 0.002 | 0.0014 |
Eisosomes | 0.0003 | 0.0002 | 0.0002 | 0.0004 | 0.0001 | 0.0001 | 0.0005 | 0.0006 | 0.0005 | 0.0001 | 0.0001 | 0.0001 | 0.0007 | 0.0002 | 0.0006 | 0.0002 | 0.0002 | 0.0001 |
Endoplasmic Reticulum | 0.0005 | 0.0004 | 0 | 0.0014 | 0 | 0 | 0.0006 | 0.0002 | 0.0004 | 0 | 0 | 0 | 0.0006 | 0.0001 | 0.0003 | 0 | 0.0001 | 0.0002 |
Endosome | 0.0103 | 0.0182 | 0.0071 | 0.0077 | 0.0006 | 0.0035 | 0.0135 | 0.0144 | 0.0064 | 0.0008 | 0.0029 | 0.0071 | 0.0077 | 0.0228 | 0.0131 | 0.0009 | 0.0046 | 0.0068 |
Golgi | 0.0158 | 0.0282 | 0.0228 | 0.0043 | 0.0011 | 0.0127 | 0.0227 | 0.0254 | 0.0156 | 0.0005 | 0.0063 | 0.0071 | 0.0238 | 0.0484 | 0.0224 | 0.0018 | 0.0045 | 0.0153 |
Lipid Particles | 0.0307 | 0.0137 | 0.0123 | 0.0019 | 0.0002 | 0.0046 | 0.0166 | 0.0048 | 0.0029 | 0.0201 | 0.009 | 0.0032 | 0.0252 | 0.0233 | 0.0119 | 0.0007 | 0.0023 | 0.0052 |
Mitochondria | 0.8881 | 0.8801 | 0.9324 | 0.9146 | 0.9964 | 0.9657 | 0.8342 | 0.8441 | 0.9358 | 0.9688 | 0.9385 | 0.9755 | 0.8503 | 0.8686 | 0.858 | 0.9913 | 0.8727 | 0.9446 |
None | 0.0011 | 0.0001 | 0 | 0.001 | 0 | 0.0068 | 0.0011 | 0.0001 | 0.0005 | 0 | 0 | 0 | 0.0008 | 0.0001 | 0.0003 | 0.0001 | 0 | 0 |
Nuclear Periphery | 0.0028 | 0.0008 | 0 | 0.0019 | 0 | 0 | 0.0006 | 0.0001 | 0.0001 | 0 | 0 | 0 | 0.0008 | 0.0009 | 0.0002 | 0 | 0.0003 | 0.0001 |
Nucleolus | 0.0003 | 0.0002 | 0 | 0.0004 | 0 | 0.0001 | 0.0005 | 0.0001 | 0.0001 | 0.0001 | 0.0001 | 0 | 0.0002 | 0.0002 | 0.0002 | 0.0001 | 0.0001 | 0 |
Nucleus | 0.0002 | 0.0001 | 0 | 0.0011 | 0 | 0 | 0.0004 | 0.0001 | 0.0001 | 0 | 0 | 0 | 0.0002 | 0.0001 | 0.0002 | 0.0001 | 0.0001 | 0.0001 |
Peroxisomes | 0.0146 | 0.0322 | 0.007 | 0.0012 | 0.0009 | 0.0024 | 0.0328 | 0.0147 | 0.0072 | 0.0056 | 0.0329 | 0.0034 | 0.0323 | 0.0096 | 0.0177 | 0.0016 | 0.0296 | 0.0177 |
Punctate Nuclear | 0.0006 | 0 | 0 | 0.0027 | 0 | 0 | 0.0032 | 0 | 0.0001 | 0 | 0 | 0 | 0.0003 | 0 | 0.0014 | 0 | 0 | 0 |
Vacuole | 0.0038 | 0.0028 | 0.0003 | 0.0024 | 0.0001 | 0.0003 | 0.0032 | 0.0007 | 0.0008 | 0.0009 | 0.0004 | 0.0003 | 0.0009 | 0.0036 | 0.003 | 0.0002 | 0.0082 | 0.0021 |
Vacuole Periphery | 0.0075 | 0.0028 | 0.001 | 0.0026 | 0.0003 | 0.0013 | 0.003 | 0.0023 | 0.0011 | 0.0021 | 0.0005 | 0.0007 | 0.0018 | 0.0068 | 0.011 | 0.0009 | 0.0499 | 0.0039 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 54.4629 | 37.9375 | 27.2129 | 44.9903 | 47.6871 | 46.6567 | 51.7841 | 46.6011 | 43.9208 | 51.3673 |
Translational Efficiency | 1.2844 | 1.5651 | 2.2226 | 1.2506 | 1.2995 | 1.4595 | 1.2189 | 1.3082 | 1.6202 | 1.4574 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✔ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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