Standard name | |
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Human Ortholog | |
Description | Phosphatidylserine decarboxylase of the mitochondrial inner membrane; converts phosphatidylserine to phosphatidylethanolamine; regulates mitochondrial fusion and morphology by affecting lipid mixing in the mitochondrial membrane and by influencing the ratio of long to short forms of Mgm1p; partly exposed to the mitochondrial intermembrane space; autocatalytically processed |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 11 | 15 | 3 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 7 | 6 | 1 | – | 3 | – | 18 | 22 | 33 | 10 | 16 | 28 |
Bud | 2 | 11 | 4 | 7 | 5 | 11 | 12 | 17 | 14 | 21 | 25 | 24 | 0 | 1 | 0 | – | 3 | – | 5 | 5 | 2 | 3 | 6 | 9 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 2 | 0 | 1 | – | 1 | – | 9 | 11 | 4 | 5 | 13 | 16 |
Bud Site | 0 | 0 | 0 | 0 | 1 | 2 | 6 | 5 | 3 | 8 | 4 | 5 | 0 | 0 | 0 | – | 1 | – | – | – | – | – | – | – |
Cell Periphery | 4 | 6 | 10 | 8 | 2 | 1 | 1 | 3 | 3 | 2 | 9 | 5 | 4 | 6 | 3 | – | 6 | – | 4 | 5 | 3 | 1 | 4 | 6 |
Cytoplasm | 108 | 176 | 79 | 53 | 47 | 34 | 43 | 65 | 40 | 42 | 63 | 50 | 137 | 146 | 183 | – | 16 | – | 35 | 67 | 11 | 20 | 29 | 29 |
Endoplasmic Reticulum | 45 | 60 | 27 | 11 | 10 | 11 | 5 | 12 | 4 | 3 | 2 | 7 | 16 | 15 | 0 | – | 5 | – | 91 | 97 | 62 | 28 | 18 | 11 |
Endosome | 45 | 33 | 40 | 18 | 72 | 7 | 9 | 23 | 5 | 2 | 1 | 0 | 11 | 5 | 4 | – | 4 | – | 41 | 38 | 27 | 14 | 18 | 23 |
Golgi | 3 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | – | 1 | – | 15 | 7 | 11 | 2 | 2 | 3 |
Mitochondria | 51 | 103 | 75 | 78 | 137 | 314 | 391 | 495 | 315 | 450 | 385 | 456 | 6 | 0 | 1 | – | 6 | – | 208 | 193 | 205 | 157 | 227 | 229 |
Nucleus | 0 | 1 | 0 | 0 | 0 | 6 | 9 | 15 | 8 | 1 | 6 | 3 | 1 | 1 | 1 | – | 0 | – | 0 | 1 | 0 | 0 | 0 | 1 |
Nuclear Periphery | 2 | 0 | 0 | 0 | 0 | 1 | 2 | 7 | 1 | 4 | 1 | 7 | 0 | 0 | 0 | – | 1 | – | 2 | 1 | 2 | 0 | 4 | 1 |
Nucleolus | 0 | 0 | 0 | 1 | 1 | 0 | 3 | 6 | 2 | 5 | 2 | 3 | 0 | 0 | 0 | – | 0 | – | 0 | 1 | 0 | 0 | 1 | 1 |
Peroxisomes | 0 | 0 | 7 | 5 | 13 | 0 | 4 | 8 | 2 | 1 | 5 | 2 | 1 | 0 | 2 | – | 0 | – | 2 | 2 | 4 | 4 | 2 | 6 |
SpindlePole | 2 | 1 | 10 | 3 | 8 | 6 | 8 | 31 | 7 | 12 | 15 | 25 | 1 | 1 | 3 | – | 5 | – | 6 | 6 | 4 | 2 | 8 | 8 |
Vac/Vac Membrane | 55 | 33 | 31 | 16 | 41 | 43 | 55 | 30 | 27 | 19 | 12 | 6 | 16 | 8 | 13 | – | 4 | – | 35 | 50 | 8 | 26 | 26 | 32 |
Unique Cell Count | 288 | 382 | 247 | 161 | 265 | 378 | 454 | 590 | 363 | 481 | 435 | 490 | 187 | 179 | 202 | 43 | 485 | 525 | 389 | 281 | 387 | 420 | ||
Labelled Cell Count | 328 | 439 | 287 | 202 | 337 | 436 | 548 | 718 | 432 | 570 | 531 | 593 | 202 | 189 | 212 | 56 | 485 | 525 | 389 | 281 | 387 | 420 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 5.5 | 5.7 | 5.1 | 6.0 | 5.1 | 4.1 | 3.7 | 3.8 | 3.6 | 3.2 | 3.3 | 3.1 | 6.3 | 5.8 | 6.0 | – | 6.1 | – | 6.4 | 6.3 | 6.0 |
Std Deviation (1e-4) | 0.8 | 0.9 | 1.3 | 6.6 | 1.4 | 1.2 | 1.1 | 1.2 | 0.9 | 0.9 | 0.9 | 0.9 | 1.0 | 1.1 | 1.3 | – | 1.6 | – | 1.3 | 1.6 | 1.4 |
Intensity Change (Log2) | – | – | – | 0.22 | -0.0 | -0.34 | -0.48 | -0.44 | -0.52 | -0.69 | -0.64 | -0.73 | 0.29 | 0.18 | 0.22 | – | 0.25 | – | 0.31 | 0.29 | 0.23 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | – |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | – |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | – |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | – |
Cell Periphery | 0.4 | -2.5 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | -1.1 | -0.4 | -1.6 | – | 0 | – |
Cytoplasm | 0.2 | -3.7 | -7.3 | -7.5 | -7.3 | -6.4 | -8.0 | -5.4 | -7.3 | 8.5 | 10.1 | 12.5 | – | 0.7 | – |
Endoplasmic Reticulum | -1.4 | -3.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | -0.8 | -0.9 | -4.8 | – | 0 | – |
Endosome | -1.4 | 3.0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | -3.3 | -4.4 | -5.0 | – | -1.2 | – |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | – |
Mitochondria | 3.7 | 4.9 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | -7.2 | -8.1 | -8.4 | – | -2.2 | – |
Nucleus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | – |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | – |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | – |
Peroxisomes | 0 | 1.2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | – |
SpindlePole | -1.2 | -0.6 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | -1.6 | – | 0 | – |
Vacuole | -0.8 | 1.0 | -0.4 | -0.2 | -3.8 | -2.1 | -4.3 | -5.1 | -6.6 | -1.3 | -2.9 | -2.2 | – | -0.6 | – |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 2.9394 | 3.276 | 3.1754 | 2.5945 | 2.8552 | 3.0365 | 5.2063 | 6.1603 | 5.6254 | 5.2469 | 5.7572 | 5.9506 | 5.1371 | 5.9428 | 5.7749 | 5.6467 | 5.0116 | 5.4972 |
Actin | 0.0268 | 0.0133 | 0.0248 | 0.0033 | 0.0084 | 0.0095 | 0.0145 | 0.0106 | 0.0185 | 0.0036 | 0.0168 | 0.0047 | 0.023 | 0.0101 | 0.012 | 0.0095 | 0.0057 | 0.0095 |
Bud | 0.0024 | 0.0065 | 0.0038 | 0.0011 | 0.0026 | 0.0015 | 0.0046 | 0.0033 | 0.004 | 0.0029 | 0.0014 | 0.0013 | 0.0021 | 0.007 | 0.003 | 0.0023 | 0.0033 | 0.0017 |
Bud Neck | 0.0063 | 0.0029 | 0.006 | 0.0103 | 0.001 | 0.0022 | 0.0021 | 0.0011 | 0.0071 | 0.0025 | 0.0008 | 0.0097 | 0.0014 | 0.0043 | 0.0035 | 0.0431 | 0.0011 | 0.0028 |
Bud Periphery | 0.0069 | 0.0119 | 0.0081 | 0.0037 | 0.0089 | 0.0038 | 0.009 | 0.0053 | 0.0083 | 0.009 | 0.0019 | 0.0028 | 0.0044 | 0.0108 | 0.0056 | 0.0045 | 0.0164 | 0.0058 |
Bud Site | 0.0077 | 0.0463 | 0.012 | 0.0016 | 0.0026 | 0.0015 | 0.0141 | 0.0252 | 0.0041 | 0.0049 | 0.0016 | 0.0028 | 0.0067 | 0.0564 | 0.0098 | 0.003 | 0.0026 | 0.0014 |
Cell Periphery | 0.0028 | 0.0055 | 0.0059 | 0.002 | 0.0047 | 0.0015 | 0.0017 | 0.003 | 0.0022 | 0.0088 | 0.0003 | 0.0011 | 0.0021 | 0.0033 | 0.0045 | 0.0034 | 0.0019 | 0.0033 |
Cytoplasm | 0.0399 | 0.0629 | 0.0545 | 0.0235 | 0.0319 | 0.0289 | 0.0324 | 0.0637 | 0.0408 | 0.0665 | 0.0258 | 0.0443 | 0.0359 | 0.0623 | 0.0256 | 0.0369 | 0.0142 | 0.0296 |
Cytoplasmic Foci | 0.0576 | 0.0687 | 0.0462 | 0.0466 | 0.0589 | 0.0377 | 0.06 | 0.0893 | 0.0604 | 0.0286 | 0.0938 | 0.051 | 0.0612 | 0.065 | 0.0509 | 0.056 | 0.062 | 0.0458 |
Eisosomes | 0.0005 | 0.0009 | 0.001 | 0.0012 | 0.0004 | 0.0004 | 0.0005 | 0.001 | 0.0006 | 0.0009 | 0.0002 | 0.0002 | 0.0012 | 0.0005 | 0.0011 | 0.0027 | 0.0003 | 0.0004 |
Endoplasmic Reticulum | 0.0197 | 0.0226 | 0.0297 | 0.0066 | 0.0245 | 0.0207 | 0.0221 | 0.0256 | 0.021 | 0.0048 | 0.0475 | 0.016 | 0.014 | 0.0238 | 0.01 | 0.0054 | 0.0045 | 0.0184 |
Endosome | 0.2148 | 0.1594 | 0.1736 | 0.1408 | 0.2104 | 0.1309 | 0.2076 | 0.1962 | 0.1555 | 0.0696 | 0.1039 | 0.1555 | 0.1725 | 0.1622 | 0.1309 | 0.0697 | 0.1539 | 0.1546 |
Golgi | 0.1028 | 0.0985 | 0.1019 | 0.0955 | 0.0942 | 0.0899 | 0.1088 | 0.1105 | 0.1216 | 0.0428 | 0.1504 | 0.1094 | 0.1381 | 0.1301 | 0.1251 | 0.0791 | 0.1412 | 0.1361 |
Lipid Particles | 0.0298 | 0.007 | 0.0119 | 0.0077 | 0.0126 | 0.01 | 0.0205 | 0.0131 | 0.0102 | 0.0018 | 0.0029 | 0.0056 | 0.0149 | 0.0033 | 0.0062 | 0.0011 | 0.0031 | 0.0064 |
Mitochondria | 0.4038 | 0.4393 | 0.4819 | 0.593 | 0.4457 | 0.6068 | 0.4534 | 0.3975 | 0.498 | 0.7147 | 0.464 | 0.5562 | 0.4798 | 0.4194 | 0.581 | 0.6519 | 0.5666 | 0.5615 |
None | 0.009 | 0.0146 | 0.0055 | 0.0014 | 0.0045 | 0.0111 | 0.0068 | 0.0201 | 0.0085 | 0.012 | 0.0284 | 0.0084 | 0.007 | 0.0084 | 0.0032 | 0.0014 | 0.0009 | 0.0012 |
Nuclear Periphery | 0.0091 | 0.0021 | 0.002 | 0.0005 | 0.0043 | 0.0051 | 0.0037 | 0.0035 | 0.0028 | 0.0009 | 0.0027 | 0.0021 | 0.0015 | 0.002 | 0.0013 | 0.0004 | 0.0012 | 0.0012 |
Nucleolus | 0.0007 | 0.001 | 0.0003 | 0.0003 | 0.0004 | 0.0022 | 0.0008 | 0.0004 | 0.0003 | 0.0003 | 0.0001 | 0.0003 | 0.0003 | 0.0028 | 0.0002 | 0.0003 | 0.0001 | 0.0002 |
Nucleus | 0.0027 | 0.0018 | 0.001 | 0.0004 | 0.0016 | 0.0052 | 0.0013 | 0.0016 | 0.0008 | 0.0006 | 0.0003 | 0.0008 | 0.0008 | 0.0021 | 0.0006 | 0.0004 | 0.0005 | 0.0005 |
Peroxisomes | 0.019 | 0.0102 | 0.0084 | 0.0126 | 0.0568 | 0.0152 | 0.0137 | 0.0075 | 0.0134 | 0.013 | 0.0481 | 0.0103 | 0.0161 | 0.0086 | 0.0145 | 0.0222 | 0.0084 | 0.0083 |
Punctate Nuclear | 0.001 | 0.001 | 0.0004 | 0.0003 | 0.0019 | 0.0023 | 0.0025 | 0.0004 | 0.0003 | 0.0001 | 0.0003 | 0.0002 | 0.0006 | 0.0004 | 0.0003 | 0.0001 | 0.0002 | 0.0002 |
Vacuole | 0.0264 | 0.0167 | 0.0124 | 0.015 | 0.0161 | 0.0071 | 0.0129 | 0.0148 | 0.0148 | 0.0062 | 0.0028 | 0.0095 | 0.0105 | 0.0127 | 0.0063 | 0.0035 | 0.0065 | 0.0059 |
Vacuole Periphery | 0.0103 | 0.0067 | 0.0088 | 0.0325 | 0.0076 | 0.0066 | 0.0071 | 0.0062 | 0.0067 | 0.0056 | 0.0058 | 0.0078 | 0.0061 | 0.0044 | 0.0044 | 0.0029 | 0.0055 | 0.0054 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 30.0995 | 28.2197 | 24.8361 | 36.0447 | 42.3568 | 34.4852 | 28.6988 | 33.5891 | 37.9887 | 41.5672 |
Translational Efficiency | 1.0921 | 0.8434 | 0.776 | 0.7476 | 0.6428 | 1.0387 | 0.8034 | 0.6877 | 0.6934 | 0.6934 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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