Standard name | |
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Human Ortholog | |
Description | Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; affects transcription by acting as target of activators and repressors; forms part of the tail domain of mediator |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 7 | 1 | 3 | 1 | 2 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 1 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 2 | 1 | 4 | 6 | 10 | 7 | 4 | 13 | 9 | 11 | 0 | 1 | 1 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 4 | 0 | 3 | 12 | 13 | 18 | 23 | 17 | 12 | 10 | 8 | 4 | 12 | 25 | 25 | 5 | 14 | 7 | 0 | 0 | 0 | 0 | 1 | 0 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 |
Endosome | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 2 | 1 | 0 | 3 | 1 | 4 | 1 | 0 | 1 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 2 | 0 | 0 | 0 | 2 | 2 | 1 | 2 |
Mitochondria | 1 | 18 | 51 | 55 | 48 | 88 | 161 | 170 | 198 | 259 | 149 | 228 | 4 | 6 | 16 | 7 | 3 | 3 | 1 | 0 | 3 | 0 | 0 | 2 |
Nucleus | 131 | 96 | 248 | 205 | 278 | 227 | 330 | 387 | 269 | 318 | 225 | 334 | 138 | 145 | 159 | 66 | 61 | 59 | 131 | 101 | 241 | 54 | 152 | 134 |
Nuclear Periphery | 0 | 1 | 2 | 0 | 6 | 3 | 12 | 10 | 8 | 12 | 6 | 11 | 1 | 3 | 2 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 39 | 23 | 40 | 37 | 30 | 50 | 78 | 95 | 103 | 122 | 94 | 185 | 36 | 34 | 50 | 17 | 11 | 14 | 37 | 6 | 34 | 10 | 43 | 53 |
Peroxisomes | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 3 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 1 | 0 | 0 | 1 | 1 | 4 | 1 | 0 | 2 | 1 | 1 | 2 | 1 | 0 | 0 | 1 | 0 | 2 | 0 | 1 | 0 | 1 | 1 |
Vac/Vac Membrane | 1 | 1 | 2 | 1 | 3 | 1 | 0 | 1 | 1 | 2 | 1 | 1 | 1 | 2 | 1 | 3 | 1 | 3 | 1 | 3 | 6 | 3 | 11 | 9 |
Unique Cell Count | 156 | 110 | 278 | 236 | 315 | 296 | 430 | 490 | 396 | 493 | 320 | 482 | 164 | 180 | 201 | 85 | 86 | 73 | 183 | 115 | 298 | 77 | 217 | 211 |
Labelled Cell Count | 179 | 141 | 348 | 311 | 384 | 394 | 621 | 695 | 596 | 742 | 495 | 777 | 198 | 217 | 257 | 102 | 95 | 86 | 183 | 115 | 298 | 77 | 217 | 211 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 9.1 | 5.7 | 5.4 | 5.1 | 5.6 | 4.9 | 4.7 | 4.7 | 4.3 | 4.3 | 4.2 | 4.2 | 8.0 | 7.1 | 6.5 | 9.5 | 10.2 | 10.7 | 7.4 | 8.2 | 8.6 |
Std Deviation (1e-4) | 1.3 | 1.0 | 1.0 | 1.2 | 1.3 | 1.4 | 1.4 | 1.3 | 1.2 | 1.1 | 1.1 | 1.3 | 1.9 | 2.1 | 1.8 | 1.9 | 2.6 | 2.3 | 1.4 | 1.6 | 1.6 |
Intensity Change (Log2) | – | – | – | -0.09 | 0.04 | -0.14 | -0.2 | -0.22 | -0.35 | -0.32 | -0.36 | -0.37 | 0.55 | 0.38 | 0.27 | 0.81 | 0.91 | 0.98 | 0.45 | 0.6 | 0.66 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 2.7 | 2.3 | 3.2 | 2.9 | 2.0 | 1.7 | 0 | 1.3 | 0 | 3.5 | 5.6 | 5.2 | 0 | 0 | 0 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 1.4 | -1.0 | 3.2 | 0 | 0 | 0 | 0 | 0 | 0 | -4.9 | -4.8 | -3.2 | -2.2 | -3.4 | -3.0 |
Nucleus | -0.8 | -0.4 | -4.0 | -4.2 | -3.6 | -6.4 | -7.5 | -5.7 | -6.2 | -1.5 | -2.6 | -3.1 | -2.7 | -4.1 | -1.9 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0.4 | -1.8 | 0.8 | 0 | 0 | 0 | 0 | 0 | 0 | 2.0 | 1.3 | 2.9 | 1.2 | -0.4 | 1.0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 4.0836 | 4.5921 | 3.6597 | 3.5647 | 3.5617 | 3.5954 | 3.5369 | 4.6639 | 4.3048 | 4.7434 | 3.951 | 4.3409 | 6.6971 | 5.8579 | 5.4624 | 5.2825 | 5.8723 | 5.32 |
Actin | 0.0514 | 0.0031 | 0.0119 | 0.038 | 0.019 | 0.0001 | 0.0354 | 0.0027 | 0.0449 | 0.0155 | 0.0032 | 0.036 | 0.018 | 0 | 0.0004 | 0.0018 | 0.0001 | 0 |
Bud | 0.0007 | 0.0004 | 0.0016 | 0.0002 | 0.0006 | 0.0001 | 0.0003 | 0.0001 | 0.0007 | 0.0002 | 0.0029 | 0.0005 | 0.0003 | 0 | 0 | 0.0002 | 0 | 0 |
Bud Neck | 0.0104 | 0.0002 | 0.001 | 0.0004 | 0.0027 | 0.0011 | 0.0007 | 0.0002 | 0.0004 | 0.0001 | 0.002 | 0.0015 | 0.0003 | 0.0001 | 0.0001 | 0.0006 | 0.0011 | 0.001 |
Bud Periphery | 0.0018 | 0.0001 | 0.0026 | 0.0004 | 0.0019 | 0.0003 | 0.0004 | 0.0001 | 0.0012 | 0.0002 | 0.0052 | 0.001 | 0.0004 | 0 | 0 | 0.0003 | 0.0001 | 0.0001 |
Bud Site | 0.01 | 0.0007 | 0.005 | 0.0006 | 0.0036 | 0.0001 | 0.0014 | 0.0004 | 0.002 | 0.0003 | 0.0067 | 0.0006 | 0.0003 | 0 | 0.0001 | 0.0015 | 0.0002 | 0.0001 |
Cell Periphery | 0.001 | 0.0001 | 0.0005 | 0.0002 | 0.0007 | 0.0002 | 0.0001 | 0 | 0.0002 | 0 | 0.0004 | 0.0001 | 0.0001 | 0 | 0 | 0.0001 | 0 | 0 |
Cytoplasm | 0.0018 | 0.001 | 0.0005 | 0.0001 | 0.0003 | 0.0002 | 0.028 | 0 | 0.0012 | 0.0051 | 0.0161 | 0.0013 | 0.0084 | 0 | 0.0015 | 0.0005 | 0.0001 | 0 |
Cytoplasmic Foci | 0.0148 | 0.0006 | 0.0097 | 0.0022 | 0.0101 | 0.0001 | 0.0159 | 0.0028 | 0.0039 | 0.0047 | 0.003 | 0.003 | 0.0007 | 0 | 0.0048 | 0.0071 | 0 | 0 |
Eisosomes | 0.0009 | 0 | 0.0002 | 0.0003 | 0.0007 | 0 | 0.0002 | 0 | 0.0002 | 0.0001 | 0.0001 | 0.0001 | 0.0005 | 0 | 0 | 0.0001 | 0 | 0 |
Endoplasmic Reticulum | 0.004 | 0.0008 | 0.0013 | 0.0005 | 0.0007 | 0.0001 | 0.0026 | 0 | 0.0023 | 0.0022 | 0.0048 | 0.0018 | 0.006 | 0 | 0.002 | 0.0006 | 0 | 0 |
Endosome | 0.0231 | 0.0012 | 0.0136 | 0.0054 | 0.0124 | 0.0002 | 0.0106 | 0.0002 | 0.0035 | 0.0131 | 0.0153 | 0.0082 | 0.0053 | 0 | 0.0084 | 0.0024 | 0.0001 | 0 |
Golgi | 0.0144 | 0.0002 | 0.0076 | 0.0088 | 0.0045 | 0 | 0.0046 | 0.0007 | 0.0026 | 0.0016 | 0.0014 | 0.0051 | 0.0006 | 0 | 0.0006 | 0.0011 | 0 | 0 |
Lipid Particles | 0.0232 | 0.0001 | 0.0161 | 0.0361 | 0.0063 | 0.0006 | 0.0179 | 0.0004 | 0.0039 | 0.0021 | 0.0011 | 0.0047 | 0.0006 | 0 | 0.0054 | 0.0067 | 0.0001 | 0 |
Mitochondria | 0.0217 | 0.0005 | 0.0296 | 0.0714 | 0.0439 | 0.0062 | 0.0025 | 0.0002 | 0.0132 | 0.0053 | 0.0124 | 0.0053 | 0.0023 | 0.0001 | 0.0003 | 0.002 | 0.0004 | 0.0001 |
None | 0.0017 | 0.0005 | 0.0006 | 0.0002 | 0.0004 | 0.0001 | 0.0223 | 0 | 0.0005 | 0.0036 | 0.0041 | 0.0007 | 0.0623 | 0 | 0.0005 | 0.0008 | 0.0001 | 0 |
Nuclear Periphery | 0.0147 | 0.0029 | 0.0058 | 0.0011 | 0.0032 | 0.0031 | 0.0207 | 0.0066 | 0.009 | 0.042 | 0.0222 | 0.0127 | 0.0338 | 0.0005 | 0.0164 | 0.015 | 0.0033 | 0.0002 |
Nucleolus | 0.0614 | 0.0522 | 0.0541 | 0.0213 | 0.3127 | 0.1593 | 0.0425 | 0.0515 | 0.0328 | 0.0134 | 0.1205 | 0.1131 | 0.0324 | 0.0326 | 0.0303 | 0.0365 | 0.1754 | 0.1137 |
Nucleus | 0.7016 | 0.934 | 0.8153 | 0.8054 | 0.5492 | 0.8259 | 0.7314 | 0.9259 | 0.854 | 0.8695 | 0.7486 | 0.79 | 0.8212 | 0.9664 | 0.907 | 0.8925 | 0.81 | 0.8835 |
Peroxisomes | 0.0151 | 0 | 0.0073 | 0.0037 | 0.0109 | 0.0001 | 0.0144 | 0.0066 | 0.004 | 0.0034 | 0.0008 | 0.0038 | 0.0002 | 0 | 0.0006 | 0.0011 | 0 | 0 |
Punctate Nuclear | 0.0129 | 0.0008 | 0.0027 | 0.0006 | 0.0024 | 0.0009 | 0.0468 | 0.001 | 0.0173 | 0.0161 | 0.0186 | 0.0092 | 0.0038 | 0.0002 | 0.0209 | 0.0279 | 0.0085 | 0.0013 |
Vacuole | 0.0076 | 0.0004 | 0.0061 | 0.0011 | 0.0064 | 0.0006 | 0.0008 | 0.0002 | 0.0014 | 0.0004 | 0.0083 | 0.0007 | 0.0008 | 0 | 0.0003 | 0.0006 | 0.0002 | 0.0001 |
Vacuole Periphery | 0.0054 | 0.0001 | 0.0067 | 0.0019 | 0.0072 | 0.0008 | 0.0005 | 0.0003 | 0.0008 | 0.0012 | 0.0022 | 0.0006 | 0.0017 | 0 | 0.0003 | 0.0006 | 0.0001 | 0 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 24.4748 | 26.1332 | 27.5095 | 38.0522 | 28.8679 | 21.7433 | 36.1783 | 42.2 | 33.6645 | 37.6987 |
Translational Efficiency | 1.3673 | 1.3928 | 1.3268 | 0.7421 | 1.0421 | 1.5925 | 0.9326 | 0.8873 | 1.216 | 1.0439 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✔ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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