Standard name | |
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Human Ortholog | |
Description | NAD-dependent glycerol 3-phosphate dehydrogenase; expression is controlled by an oxygen-independent signaling pathway required to regulate metabolism under anoxic conditions; located in cytosol and mitochondria; constitutively active but is inactivated via phosphorylation by energy-stress responsive kinase SNF1; GPD2 has a paralog, GPD1, that arose from the whole genome duplication |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 3 | 3 | 4 | 12 | 6 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 1 | 0 | 4 | 0 | 1 | 4 | 0 | 4 | 0 | 0 | 1 | 0 | 0 | 0 | 2 | 0 | 1 | 1 | 4 | 1 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 0 | 1 | 3 | 1 | 4 | 12 | 22 | 16 | 19 | 46 | 20 | 15 | 0 | 2 | 2 | 1 | 3 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 127 | 96 | 311 | 204 | 241 | 302 | 467 | 289 | 324 | 358 | 216 | 276 | 170 | 218 | 265 | 175 | 92 | 96 | 114 | 93 | 290 | 100 | 229 | 303 |
Endoplasmic Reticulum | 0 | 1 | 2 | 2 | 0 | 10 | 26 | 30 | 26 | 49 | 18 | 32 | 0 | 2 | 1 | 3 | 4 | 1 | 0 | 0 | 4 | 0 | 0 | 2 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 1 | 1 | 1 | 3 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 2 | 0 | 0 | 0 | 0 | 0 | 2 | 4 | 7 | 5 | 14 | 9 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 0 |
Nucleus | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 3 | 2 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 1 | 0 | 0 | 1 | 4 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vac/Vac Membrane | 1 | 0 | 1 | 0 | 1 | 1 | 4 | 24 | 6 | 4 | 4 | 0 | 0 | 0 | 1 | 3 | 0 | 2 | 0 | 0 | 2 | 1 | 0 | 3 |
Unique Cell Count | 130 | 97 | 315 | 205 | 243 | 322 | 512 | 359 | 374 | 435 | 263 | 330 | 170 | 220 | 265 | 177 | 93 | 98 | 120 | 96 | 307 | 105 | 239 | 319 |
Labelled Cell Count | 131 | 98 | 317 | 207 | 247 | 328 | 525 | 372 | 390 | 474 | 288 | 347 | 170 | 223 | 270 | 184 | 99 | 103 | 120 | 96 | 307 | 105 | 239 | 319 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 38.6 | 62.7 | 55.3 | 53.9 | 47.6 | 38.1 | 34.1 | 30.8 | 30.0 | 28.4 | 26.0 | 25.8 | 68.4 | 69.8 | 64.1 | 82.0 | 85.9 | 75.5 | 57.8 | 60.8 | 60.1 |
Std Deviation (1e-4) | 9.9 | 13.2 | 12.2 | 11.9 | 11.4 | 9.1 | 7.7 | 7.4 | 7.0 | 6.0 | 5.8 | 5.7 | 17.4 | 18.3 | 13.7 | 28.5 | 28.1 | 33.8 | 14.0 | 18.6 | 17.2 |
Intensity Change (Log2) | – | – | – | -0.04 | -0.22 | -0.54 | -0.7 | -0.85 | -0.88 | -0.96 | -1.09 | -1.1 | 0.31 | 0.33 | 0.21 | 0.57 | 0.63 | 0.45 | 0.06 | 0.14 | 0.12 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3.8 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 2.3 | 2.7 | 2.7 | 3.1 | 5.3 | 4.1 | 2.8 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 0.9 | 0.5 | -3.3 | -4.4 | -7.6 | -5.9 | -7.2 | -7.0 | -6.7 | 1.5 | 0.4 | 1.8 | 0.1 | 0.1 | -0.6 |
Endoplasmic Reticulum | 0 | 0 | 2.3 | 3.4 | 4.7 | 4.2 | 5.7 | 4.1 | 5.1 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 4.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | 0 | 0 | 0 | 0 | 4.4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 58.4901 | 73.8611 | 66.0082 | 67.554 | 55.9921 | 65.8246 | 58.1601 | 80.0481 | 67.3403 | 64.5176 | 65.4749 | 74.3506 | 65.0105 | 84.3561 | 81.5726 | 73.436 | 61.1841 | 79.4984 |
Actin | 0.0088 | 0.0001 | 0.0061 | 0 | 0.0026 | 0.0001 | 0.0095 | 0 | 0.0112 | 0.0099 | 0 | 0.0008 | 0.0066 | 0.0001 | 0.0009 | 0.0002 | 0.0119 | 0.0004 |
Bud | 0.0002 | 0 | 0.0001 | 0 | 0.0008 | 0.0001 | 0.0006 | 0 | 0.0003 | 0.0006 | 0 | 0 | 0.0014 | 0.0001 | 0.0003 | 0.0004 | 0.001 | 0.0001 |
Bud Neck | 0.0002 | 0.0001 | 0.0026 | 0.0001 | 0.0006 | 0.0002 | 0.0009 | 0 | 0.0002 | 0.0002 | 0.0001 | 0.0002 | 0.0049 | 0.0001 | 0.0001 | 0.0002 | 0.0013 | 0.0006 |
Bud Periphery | 0.0001 | 0 | 0.0001 | 0 | 0.0005 | 0 | 0.0005 | 0 | 0.0003 | 0.0006 | 0 | 0 | 0.0009 | 0 | 0.0003 | 0.0001 | 0.0019 | 0.0001 |
Bud Site | 0.0002 | 0 | 0.0003 | 0 | 0.0008 | 0 | 0.0025 | 0 | 0.0011 | 0.0016 | 0 | 0.0001 | 0.0029 | 0 | 0.0002 | 0.0001 | 0.0034 | 0.0001 |
Cell Periphery | 0.0002 | 0 | 0 | 0 | 0.0004 | 0 | 0.0005 | 0 | 0.0003 | 0.0002 | 0 | 0 | 0.0011 | 0 | 0.0003 | 0.0001 | 0.0004 | 0.0001 |
Cytoplasm | 0.9359 | 0.9969 | 0.9734 | 0.9933 | 0.8106 | 0.987 | 0.9032 | 0.9982 | 0.9203 | 0.9343 | 0.9872 | 0.9365 | 0.8816 | 0.9901 | 0.9499 | 0.9508 | 0.7999 | 0.9623 |
Cytoplasmic Foci | 0.0068 | 0 | 0.0008 | 0.0001 | 0.04 | 0.0003 | 0.012 | 0 | 0.0082 | 0.0062 | 0.0001 | 0.0035 | 0.0124 | 0.0014 | 0.011 | 0.0004 | 0.0164 | 0.0014 |
Eisosomes | 0.0001 | 0 | 0.0001 | 0 | 0.0004 | 0 | 0.0001 | 0 | 0.0002 | 0.0001 | 0 | 0 | 0.0003 | 0 | 0.0008 | 0.0001 | 0.0003 | 0 |
Endoplasmic Reticulum | 0.001 | 0 | 0.001 | 0 | 0.0007 | 0.0002 | 0.0032 | 0 | 0.0007 | 0.0013 | 0 | 0.0001 | 0.0022 | 0 | 0.0022 | 0.0005 | 0.0039 | 0.0003 |
Endosome | 0.0024 | 0 | 0.0025 | 0 | 0.0029 | 0.0008 | 0.0057 | 0 | 0.0058 | 0.0072 | 0 | 0.0009 | 0.0089 | 0 | 0.004 | 0.0015 | 0.0325 | 0.0002 |
Golgi | 0.001 | 0 | 0.0007 | 0 | 0.0013 | 0 | 0.0013 | 0 | 0.0049 | 0.0115 | 0 | 0.0021 | 0.0022 | 0 | 0.0016 | 0.0001 | 0.0038 | 0 |
Lipid Particles | 0.0041 | 0 | 0.0007 | 0 | 0.0186 | 0 | 0.0049 | 0 | 0.0039 | 0.0014 | 0 | 0.0177 | 0.0094 | 0.0006 | 0.0028 | 0.0004 | 0.0067 | 0.0001 |
Mitochondria | 0.0015 | 0 | 0.0002 | 0 | 0.0391 | 0.0001 | 0.0067 | 0 | 0.0247 | 0.0074 | 0 | 0.0059 | 0.0115 | 0.0042 | 0.0028 | 0.0008 | 0.0173 | 0.0006 |
None | 0.0043 | 0 | 0.0013 | 0.0001 | 0.0063 | 0.0001 | 0.0065 | 0 | 0.0026 | 0.0087 | 0.0001 | 0.0001 | 0.0067 | 0.0002 | 0.0084 | 0.0224 | 0.0112 | 0.0029 |
Nuclear Periphery | 0.0047 | 0.0003 | 0.0038 | 0.0007 | 0.0066 | 0.0015 | 0.0045 | 0.0001 | 0.0011 | 0.002 | 0.001 | 0.0004 | 0.0047 | 0.0002 | 0.0021 | 0.0038 | 0.0294 | 0.0016 |
Nucleolus | 0.0015 | 0 | 0.0001 | 0 | 0.0173 | 0 | 0.0071 | 0 | 0.0039 | 0.0003 | 0 | 0 | 0.0034 | 0.0004 | 0.002 | 0.0008 | 0.0177 | 0.009 |
Nucleus | 0.0181 | 0.0025 | 0.0045 | 0.0053 | 0.0227 | 0.0069 | 0.0134 | 0.0014 | 0.0037 | 0.0033 | 0.0115 | 0.0037 | 0.016 | 0.0018 | 0.0043 | 0.0099 | 0.0195 | 0.0177 |
Peroxisomes | 0.0021 | 0 | 0.0006 | 0 | 0.0051 | 0 | 0.0015 | 0 | 0.0011 | 0.0004 | 0 | 0.0274 | 0.0075 | 0.0004 | 0.0011 | 0.0001 | 0.0016 | 0 |
Punctate Nuclear | 0.0036 | 0 | 0.0008 | 0 | 0.0064 | 0.0001 | 0.0064 | 0 | 0.0008 | 0.001 | 0 | 0.0003 | 0.009 | 0 | 0.0012 | 0.0011 | 0.011 | 0.0013 |
Vacuole | 0.0018 | 0 | 0.0003 | 0.0001 | 0.0068 | 0.0018 | 0.0054 | 0 | 0.0027 | 0.0011 | 0 | 0.0001 | 0.0042 | 0.0001 | 0.0021 | 0.0039 | 0.0043 | 0.0007 |
Vacuole Periphery | 0.0013 | 0 | 0.0002 | 0.0001 | 0.0096 | 0.0006 | 0.0035 | 0 | 0.0021 | 0.0007 | 0 | 0.0001 | 0.0022 | 0.0002 | 0.0019 | 0.0025 | 0.0045 | 0.0003 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 212.2573 | 228.887 | 131.6706 | 146.4863 | 117.3253 | 222.5593 | 257.6232 | 225.6474 | 188.1657 | 150.5803 |
Translational Efficiency | 1.2583 | 1.423 | 1.4124 | 1.3177 | 1.3905 | 1.5218 | 1.4969 | 1.4532 | 1.4608 | 1.3343 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✔ |
Translational Efficiency | ✔ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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