Standard name | |
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Human Ortholog | |
Description | Catalytic subunit of adoMet-dependent tRNA methyltransferase complex; required for the methylation of the guanosine nucleotide at position 10 (m2G10) in tRNAs; contains a THUMP domain and a methyltransferase domain; another complex member is Trm112p |
ensLOC | DeepLoc | |||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 0 | 0 | 1 |
Bud | 1 | 0 | 0 | 0 | 3 | 2 | 6 | 6 | 6 | 8 | 7 | 7 | 1 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 1 | 0 | 0 | 1 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 3 | 9 | 34 | 7 | 4 | 7 | 12 | 12 | 6 | 9 | 7 | 8 | 13 | 14 | 13 | 23 | 20 | 20 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 180 | 464 | 289 | 128 | 174 | 196 | 256 | 334 | 177 | 255 | 162 | 171 | 502 | 428 | 483 | 281 | 309 | 268 | 178 | 460 | 263 | 384 | 392 | 426 |
Endoplasmic Reticulum | 0 | 2 | 2 | 0 | 0 | 2 | 0 | 1 | 0 | 1 | 1 | 3 | 1 | 4 | 4 | 16 | 10 | 11 | 0 | 2 | 4 | 2 | 3 | 2 |
Endosome | 0 | 0 | 1 | 0 | 0 | 3 | 1 | 2 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 3 | 3 | 3 | 3 | 8 |
Golgi | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 1 | 1 | 1 |
Mitochondria | 2 | 0 | 3 | 6 | 14 | 61 | 111 | 76 | 106 | 163 | 134 | 149 | 1 | 0 | 0 | 3 | 3 | 3 | 0 | 0 | 1 | 1 | 3 | 2 |
Nucleus | 1 | 2 | 1 | 0 | 0 | 2 | 1 | 3 | 2 | 2 | 1 | 1 | 2 | 4 | 3 | 5 | 3 | 1 | 0 | 0 | 0 | 0 | 2 | 1 |
Nuclear Periphery | 1 | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 1 | 2 | 6 | 5 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 4 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 1 | 5 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 0 |
Vac/Vac Membrane | 1 | 3 | 3 | 3 | 7 | 15 | 14 | 24 | 20 | 21 | 16 | 6 | 0 | 0 | 0 | 4 | 10 | 1 | 1 | 0 | 0 | 0 | 2 | 2 |
Unique Cell Count | 184 | 469 | 293 | 132 | 186 | 239 | 328 | 401 | 257 | 372 | 255 | 292 | 504 | 433 | 488 | 293 | 324 | 280 | 184 | 473 | 288 | 399 | 418 | 464 |
Labelled Cell Count | 189 | 481 | 334 | 144 | 202 | 291 | 402 | 460 | 319 | 467 | 336 | 350 | 520 | 452 | 503 | 332 | 359 | 307 | 184 | 473 | 288 | 399 | 418 | 464 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 7.2 | 10.0 | 10.4 | 8.4 | 7.7 | 6.6 | 5.9 | 6.2 | 5.5 | 5.7 | 5.1 | 4.7 | 10.1 | 9.8 | 9.0 | 18.0 | 16.5 | 18.4 | 11.2 | 10.9 | 10.8 |
Std Deviation (1e-4) | 0.9 | 1.4 | 3.9 | 2.4 | 2.6 | 2.3 | 2.0 | 1.9 | 1.1 | 2.6 | 1.8 | 0.9 | 1.1 | 1.0 | 1.0 | 4.1 | 3.8 | 4.3 | 1.3 | 1.5 | 1.6 |
Intensity Change (Log2) | – | – | – | -0.29 | -0.43 | -0.64 | -0.8 | -0.74 | -0.92 | -0.87 | -1.01 | -1.13 | -0.04 | -0.08 | -0.2 | 0.8 | 0.67 | 0.83 | 0.12 | 0.07 | 0.06 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | -2.0 | -3.7 | -3.7 | -3.8 | -4.5 | -4.2 | -4.8 | -3.9 | 0 | -5.2 | -4.5 | -5.1 | -1.5 | -2.4 | -1.8 |
Cytoplasm | -1.2 | -3.0 | -6.7 | -7.8 | -6.6 | -9.7 | -10.0 | -10.7 | -11.8 | 1.5 | 0.3 | 0.4 | -2.0 | -2.3 | -2.1 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3.4 | 2.2 | 2.6 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 0 | 3.7 | 8.6 | 10.5 | 7.3 | 11.8 | 12.7 | 13.9 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | 0 | 0 | 3.3 | 2.5 | 3.3 | 4.0 | 3.2 | 3.4 | 0 | 0 | 0 | 0 | 0 | 1.8 | 0 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 5.1169 | 6.0918 | 6.0091 | 5.5181 | 5.515 | 5.7739 | 3.4913 | 5.1839 | 4.1695 | 4.04 | 3.7433 | 4.8094 | 4.4552 | 5.603 | 4.8926 | 5.4105 | 5.0634 | 5.0044 |
Actin | 0.0188 | 0.0007 | 0.0052 | 0.0086 | 0.0052 | 0.0003 | 0.0684 | 0.0014 | 0.0295 | 0.0685 | 0.0368 | 0.002 | 0.0184 | 0.0009 | 0.0015 | 0.0001 | 0.0001 | 0.0049 |
Bud | 0.0007 | 0.0001 | 0.0003 | 0.0003 | 0.0003 | 0.0001 | 0.005 | 0.0005 | 0.0013 | 0.0009 | 0.0008 | 0.0003 | 0.0005 | 0.011 | 0.0038 | 0.0001 | 0.0001 | 0.0024 |
Bud Neck | 0.0019 | 0.0001 | 0.001 | 0.0004 | 0.001 | 0.0005 | 0.0153 | 0.0003 | 0.0023 | 0.001 | 0.0018 | 0.0019 | 0.0015 | 0.0002 | 0.0004 | 0.0004 | 0.0002 | 0.0009 |
Bud Periphery | 0.0004 | 0 | 0.0003 | 0.0001 | 0.0003 | 0 | 0.0068 | 0.0002 | 0.0011 | 0.001 | 0.0007 | 0.0003 | 0.0006 | 0.0031 | 0.0013 | 0 | 0 | 0.001 |
Bud Site | 0.0099 | 0.0005 | 0.0007 | 0.0019 | 0.0002 | 0 | 0.0083 | 0.0062 | 0.0054 | 0.014 | 0.005 | 0.0002 | 0.0031 | 0.0049 | 0.0027 | 0 | 0 | 0.0003 |
Cell Periphery | 0.0003 | 0.0002 | 0.0002 | 0.0001 | 0.0001 | 0 | 0.0008 | 0.0002 | 0.0002 | 0.0003 | 0.0002 | 0 | 0.0003 | 0.0002 | 0.0001 | 0 | 0 | 0.0001 |
Cytoplasm | 0.8818 | 0.9502 | 0.9535 | 0.9333 | 0.8937 | 0.9541 | 0.7217 | 0.968 | 0.8458 | 0.8457 | 0.7248 | 0.9526 | 0.8562 | 0.9471 | 0.9475 | 0.982 | 0.978 | 0.9498 |
Cytoplasmic Foci | 0.0117 | 0.0031 | 0.0056 | 0.0208 | 0.0161 | 0.0038 | 0.0245 | 0.0045 | 0.0193 | 0.009 | 0.047 | 0.0064 | 0.0244 | 0.0052 | 0.0084 | 0.0036 | 0.0052 | 0.0087 |
Eisosomes | 0.0002 | 0 | 0.0001 | 0.0001 | 0.0001 | 0 | 0.0004 | 0 | 0.0001 | 0.0002 | 0.0002 | 0 | 0.0002 | 0 | 0 | 0 | 0 | 0.0001 |
Endoplasmic Reticulum | 0.0072 | 0.0023 | 0.0021 | 0.0022 | 0.0025 | 0.0028 | 0.014 | 0.0031 | 0.0041 | 0.0012 | 0.0082 | 0.0014 | 0.0067 | 0.0037 | 0.0017 | 0.002 | 0.0029 | 0.0028 |
Endosome | 0.007 | 0.0019 | 0.0039 | 0.0075 | 0.0105 | 0.0026 | 0.029 | 0.0029 | 0.0274 | 0.0101 | 0.0667 | 0.0095 | 0.0272 | 0.0045 | 0.0053 | 0.003 | 0.006 | 0.0086 |
Golgi | 0.0015 | 0.0002 | 0.0009 | 0.0021 | 0.0028 | 0.0002 | 0.009 | 0.0004 | 0.0104 | 0.0046 | 0.0421 | 0.0045 | 0.005 | 0.0003 | 0.0013 | 0.0001 | 0.0002 | 0.0023 |
Lipid Particles | 0.0012 | 0.0001 | 0.0005 | 0.0018 | 0.0003 | 0.0001 | 0.0123 | 0.0002 | 0.0067 | 0.0039 | 0.0363 | 0.0086 | 0.0093 | 0.0001 | 0.0035 | 0 | 0 | 0.0012 |
Mitochondria | 0.0006 | 0.0001 | 0.0007 | 0.0008 | 0.001 | 0.0001 | 0.0071 | 0.0001 | 0.0048 | 0.0181 | 0.0067 | 0.0052 | 0.0027 | 0.0005 | 0.0012 | 0.0001 | 0.0002 | 0.0006 |
None | 0.0318 | 0.0381 | 0.0192 | 0.0052 | 0.0628 | 0.0256 | 0.0187 | 0.0096 | 0.0199 | 0.0034 | 0.0016 | 0.003 | 0.0204 | 0.0113 | 0.0152 | 0.0055 | 0.0035 | 0.0074 |
Nuclear Periphery | 0.0095 | 0.0005 | 0.0009 | 0.0016 | 0.0005 | 0.0069 | 0.02 | 0.0004 | 0.0024 | 0.0007 | 0.0016 | 0.0005 | 0.0051 | 0.002 | 0.0006 | 0.0003 | 0.0008 | 0.002 |
Nucleolus | 0.0001 | 0 | 0.0001 | 0.0002 | 0 | 0 | 0.0027 | 0 | 0.0003 | 0.0007 | 0.0006 | 0 | 0.0002 | 0.0002 | 0.0001 | 0 | 0 | 0.0002 |
Nucleus | 0.0049 | 0.0007 | 0.0013 | 0.0014 | 0.0009 | 0.0016 | 0.011 | 0.0008 | 0.0023 | 0.0014 | 0.001 | 0.0012 | 0.0035 | 0.0023 | 0.0017 | 0.0011 | 0.0014 | 0.0025 |
Peroxisomes | 0.007 | 0 | 0.0003 | 0.0032 | 0.0006 | 0.0001 | 0.0099 | 0.0001 | 0.007 | 0.0111 | 0.0111 | 0.0011 | 0.0079 | 0.0001 | 0.0014 | 0 | 0 | 0.0005 |
Punctate Nuclear | 0.0016 | 0.0002 | 0.002 | 0.0077 | 0.0003 | 0.0002 | 0.0063 | 0.0002 | 0.0032 | 0.0003 | 0.002 | 0.0005 | 0.0039 | 0.0006 | 0.0011 | 0.0001 | 0.0002 | 0.003 |
Vacuole | 0.0016 | 0.0008 | 0.0011 | 0.0008 | 0.0005 | 0.0005 | 0.0061 | 0.0006 | 0.0057 | 0.0033 | 0.0038 | 0.0005 | 0.002 | 0.0014 | 0.001 | 0.0013 | 0.001 | 0.0007 |
Vacuole Periphery | 0.0004 | 0.0001 | 0.0002 | 0.0002 | 0.0002 | 0.0003 | 0.0026 | 0.0001 | 0.001 | 0.0007 | 0.0012 | 0.0002 | 0.0007 | 0.0004 | 0.0002 | 0.0003 | 0.0002 | 0.0003 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 29.2377 | 37.8793 | 41.5999 | 27.1431 | 31.8646 | 13.552 | 30.8313 | 22.7477 | 16.192 | 32.7104 |
Translational Efficiency | 1.5285 | 1.4302 | 0.9296 | 0.8161 | 0.9019 | 1.7569 | 1.2339 | 0.9187 | 1.1143 | 0.9651 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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