Standard name | |
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Human Ortholog | |
Description | Mitochondrial peripheral inner membrane protein; contains a FAD cofactor in a domain exposed in the intermembrane space; exhibits redox activity in vitro; likely participates in ligation of heme to acytochromes c and c1 (Cyc1p and Cyt1p) |
ensLOC | DeepLoc | |||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 6 | 1 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 16 | 1 | 3 | 5 | 2 | 2 | 15 | 28 | 22 | 12 | 19 | 13 |
Bud | 8 | 10 | 32 | 11 | 29 | 68 | 43 | 31 | – | 54 | 60 | 57 | 5 | 1 | 3 | 6 | 5 | 6 | 7 | 7 | 6 | 4 | 13 | 9 |
Bud Neck | 0 | 1 | 5 | 0 | 0 | 2 | 1 | 2 | – | 0 | 2 | 1 | 6 | 0 | 4 | 1 | 12 | 1 | 5 | 10 | 5 | 8 | 18 | 17 |
Bud Site | 0 | 0 | 0 | 1 | 5 | 14 | 8 | 7 | – | 11 | 13 | 10 | 0 | 0 | 0 | 1 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 13 | 14 | 10 | 5 | 4 | 0 | 5 | 4 | – | 4 | 6 | 12 | 9 | 3 | 5 | 18 | 14 | 15 | 0 | 6 | 2 | 0 | 2 | 4 |
Cytoplasm | 78 | 193 | 158 | 137 | 129 | 223 | 233 | 226 | – | 245 | 163 | 244 | 173 | 115 | 168 | 164 | 150 | 127 | 9 | 44 | 11 | 11 | 13 | 14 |
Endoplasmic Reticulum | 5 | 8 | 9 | 0 | 0 | 1 | 2 | 1 | – | 1 | 1 | 1 | 17 | 8 | 12 | 24 | 29 | 19 | 5 | 11 | 7 | 3 | 5 | 4 |
Endosome | 96 | 46 | 24 | 37 | 40 | 13 | 12 | 13 | – | 16 | 0 | 9 | 6 | 23 | 9 | 26 | 27 | 38 | 78 | 49 | 62 | 20 | 31 | 33 |
Golgi | 3 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 1 | 0 | 0 | 5 | 5 | 3 | 20 | 11 | 11 | 2 | 7 | 8 |
Mitochondria | 318 | 155 | 280 | 231 | 440 | 809 | 883 | 702 | – | 754 | 725 | 897 | 5 | 6 | 4 | 61 | 25 | 21 | 470 | 393 | 432 | 221 | 377 | 328 |
Nucleus | 6 | 0 | 3 | 3 | 3 | 21 | 16 | 20 | – | 6 | 4 | 11 | 3 | 1 | 2 | 5 | 4 | 2 | 0 | 3 | 1 | 1 | 2 | 2 |
Nuclear Periphery | 4 | 0 | 0 | 0 | 1 | 0 | 1 | 1 | – | 2 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 9 | 1 | 4 | 0 | 3 | 1 |
Nucleolus | 2 | 0 | 0 | 0 | 2 | 5 | 9 | 9 | – | 2 | 3 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 0 | 1 | 0 | 3 | 1 |
Peroxisomes | 18 | 7 | 27 | 33 | 27 | 12 | 15 | 16 | – | 18 | 1 | 16 | 2 | 3 | 3 | 14 | 3 | 32 | 12 | 5 | 18 | 9 | 5 | 9 |
SpindlePole | 21 | 9 | 38 | 29 | 45 | 54 | 50 | 60 | – | 83 | 38 | 64 | 11 | 2 | 3 | 55 | 28 | 28 | 13 | 13 | 16 | 9 | 15 | 10 |
Vac/Vac Membrane | 88 | 54 | 17 | 16 | 47 | 27 | 32 | 29 | – | 40 | 23 | 14 | 15 | 13 | 10 | 15 | 26 | 33 | 37 | 47 | 19 | 35 | 59 | 54 |
Unique Cell Count | 528 | 447 | 508 | 405 | 605 | 987 | 1079 | 928 | 996 | 840 | 1086 | 251 | 171 | 215 | 326 | 275 | 263 | 705 | 645 | 637 | 352 | 591 | 521 | |
Labelled Cell Count | 660 | 503 | 605 | 503 | 772 | 1249 | 1310 | 1121 | 1236 | 1040 | 1340 | 269 | 176 | 226 | 400 | 330 | 327 | 705 | 645 | 637 | 352 | 591 | 521 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 4.8 | 4.5 | 4.0 | 4.1 | 3.7 | 3.6 | 3.1 | 3.3 | – | 3.0 | 2.8 | 2.9 | 5.5 | 5.3 | 5.3 | 5.7 | 5.5 | 5.9 | 6.1 | 5.9 | 5.8 |
Std Deviation (1e-4) | 0.9 | 1.0 | 1.1 | 1.7 | 1.6 | 1.3 | 1.3 | 1.2 | – | 1.2 | 0.6 | 0.7 | 0.8 | 1.0 | 0.9 | 1.2 | 1.3 | 5.5 | 1.7 | 1.4 | 1.3 |
Intensity Change (Log2) | – | – | – | 0.03 | -0.11 | -0.16 | -0.39 | -0.28 | – | -0.39 | -0.51 | -0.47 | 0.45 | 0.4 | 0.41 | 0.5 | 0.47 | 0.55 | 0.6 | 0.55 | 0.52 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Actin | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Bud Neck | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Bud Site | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Cell Periphery | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Cyto | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Endoplasmic Reticulum | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Endosome | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Golgi | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Mitochondria | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Nuclear Periphery | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Nuc | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nucleolus | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Peroxisomes | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
SpindlePole | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Vac | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cortical Patches | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Cytoplasm | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Nucleus | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Vacuole | – | – | – | – | – | – | – | – | – | – | – | – | 0.9 | 3.6 | 4.9 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | -0.1689 | 0.6246 | 0.3193 | 0.3864 | 0.0453 | 0.4296 | 2.7163 | 3.2419 | 3.0797 | 2.7678 | 3.1165 | 3.4758 | 1.8032 | 1.8417 | 1.6535 | 1.7374 | 1.7582 | 1.8534 |
Actin | 0.0083 | 0.0296 | 0.006 | 0.0105 | 0.0095 | 0.0118 | 0.0191 | 0.0216 | 0.0278 | 0.0138 | 0.0709 | 0.0157 | 0.0155 | 0.0099 | 0.0048 | 0.004 | 0.0043 | 0.0068 |
Bud | 0.0028 | 0.0035 | 0.0159 | 0.0084 | 0.0121 | 0.0071 | 0.0018 | 0.0064 | 0.0054 | 0.0061 | 0.0105 | 0.002 | 0.0348 | 0.0548 | 0.0684 | 0.0424 | 0.0448 | 0.0324 |
Bud Neck | 0.0023 | 0.0025 | 0.0091 | 0.0279 | 0.0011 | 0.007 | 0.0021 | 0.0029 | 0.0031 | 0.0434 | 0.0023 | 0.005 | 0.0037 | 0.0027 | 0.0067 | 0.0032 | 0.0031 | 0.008 |
Bud Periphery | 0.005 | 0.0048 | 0.0087 | 0.0206 | 0.0105 | 0.005 | 0.004 | 0.0179 | 0.0162 | 0.0192 | 0.0462 | 0.0061 | 0.0197 | 0.0192 | 0.0235 | 0.0179 | 0.0281 | 0.021 |
Bud Site | 0.0134 | 0.027 | 0.0238 | 0.0053 | 0.0159 | 0.0032 | 0.0077 | 0.0317 | 0.0157 | 0.0074 | 0.0077 | 0.0025 | 0.0349 | 0.1081 | 0.0723 | 0.0128 | 0.0177 | 0.0081 |
Cell Periphery | 0.0022 | 0.0037 | 0.0028 | 0.0017 | 0.0011 | 0.0018 | 0.0015 | 0.002 | 0.0018 | 0.0024 | 0.0086 | 0.0011 | 0.0036 | 0.0032 | 0.0029 | 0.0008 | 0.0039 | 0.0018 |
Cytoplasm | 0.0265 | 0.0592 | 0.034 | 0.0833 | 0.0251 | 0.0512 | 0.0349 | 0.0757 | 0.0502 | 0.0832 | 0.0631 | 0.0485 | 0.0698 | 0.0851 | 0.0956 | 0.0946 | 0.1252 | 0.1603 |
Cytoplasmic Foci | 0.1181 | 0.1373 | 0.1018 | 0.1678 | 0.1119 | 0.1252 | 0.1399 | 0.1246 | 0.1136 | 0.1123 | 0.1583 | 0.1115 | 0.1468 | 0.1198 | 0.1223 | 0.1132 | 0.1743 | 0.1379 |
Eisosomes | 0.0016 | 0.0075 | 0.0011 | 0.0013 | 0.0016 | 0.0007 | 0.0007 | 0.001 | 0.001 | 0.0005 | 0.0005 | 0.0006 | 0.0008 | 0.0005 | 0.0007 | 0.0002 | 0.001 | 0.0003 |
Endoplasmic Reticulum | 0.0073 | 0.0032 | 0.0029 | 0.0043 | 0.0012 | 0.0033 | 0.0034 | 0.0024 | 0.0025 | 0.0017 | 0.0013 | 0.0018 | 0.0078 | 0.0049 | 0.0038 | 0.0025 | 0.007 | 0.0038 |
Endosome | 0.1315 | 0.1777 | 0.096 | 0.0639 | 0.091 | 0.0944 | 0.1904 | 0.1127 | 0.1465 | 0.1195 | 0.1462 | 0.1214 | 0.1552 | 0.1474 | 0.0985 | 0.15 | 0.0813 | 0.1012 |
Golgi | 0.0419 | 0.0561 | 0.0308 | 0.0171 | 0.0382 | 0.0347 | 0.0742 | 0.0703 | 0.0548 | 0.0618 | 0.0663 | 0.0657 | 0.0359 | 0.0381 | 0.0336 | 0.0267 | 0.0273 | 0.0302 |
Lipid Particles | 0.0531 | 0.022 | 0.0203 | 0.0168 | 0.0085 | 0.0222 | 0.035 | 0.0115 | 0.0121 | 0.0081 | 0.0032 | 0.0203 | 0.0226 | 0.0085 | 0.0096 | 0.0205 | 0.0173 | 0.0101 |
Mitochondria | 0.2992 | 0.2855 | 0.3396 | 0.3041 | 0.4935 | 0.3435 | 0.3013 | 0.3744 | 0.3408 | 0.3166 | 0.3244 | 0.3816 | 0.1722 | 0.1705 | 0.1896 | 0.2683 | 0.2012 | 0.1684 |
None | 0.2111 | 0.0796 | 0.204 | 0.1703 | 0.1003 | 0.1522 | 0.1013 | 0.0623 | 0.1104 | 0.1344 | 0.022 | 0.129 | 0.181 | 0.1357 | 0.1665 | 0.1271 | 0.1341 | 0.1874 |
Nuclear Periphery | 0.0028 | 0.0014 | 0.004 | 0.0012 | 0.0009 | 0.0021 | 0.0036 | 0.0007 | 0.0019 | 0.0011 | 0.0005 | 0.0007 | 0.0065 | 0.0026 | 0.0033 | 0.004 | 0.0048 | 0.0036 |
Nucleolus | 0.0062 | 0.0073 | 0.0051 | 0.0018 | 0.0014 | 0.0046 | 0.0017 | 0.0014 | 0.0017 | 0.0019 | 0.0005 | 0.0006 | 0.0104 | 0.0079 | 0.0075 | 0.0056 | 0.0067 | 0.0066 |
Nucleus | 0.0035 | 0.0026 | 0.0045 | 0.0038 | 0.004 | 0.0068 | 0.0028 | 0.002 | 0.0029 | 0.0025 | 0.0011 | 0.0008 | 0.0114 | 0.0158 | 0.0202 | 0.0182 | 0.0151 | 0.0288 |
Peroxisomes | 0.0369 | 0.0675 | 0.0528 | 0.0407 | 0.0606 | 0.0944 | 0.0483 | 0.065 | 0.0642 | 0.0383 | 0.0532 | 0.074 | 0.0197 | 0.0205 | 0.0255 | 0.0371 | 0.0587 | 0.0375 |
Punctate Nuclear | 0.0072 | 0.0051 | 0.0137 | 0.0058 | 0.0038 | 0.0154 | 0.0041 | 0.0009 | 0.0079 | 0.0027 | 0.0008 | 0.0015 | 0.0194 | 0.0153 | 0.023 | 0.0235 | 0.0175 | 0.0299 |
Vacuole | 0.0146 | 0.0127 | 0.0166 | 0.02 | 0.0053 | 0.0092 | 0.0165 | 0.0094 | 0.0133 | 0.0181 | 0.0085 | 0.0065 | 0.022 | 0.0226 | 0.0159 | 0.0202 | 0.0201 | 0.0109 |
Vacuole Periphery | 0.0045 | 0.0041 | 0.0066 | 0.0234 | 0.0025 | 0.0042 | 0.0056 | 0.0032 | 0.006 | 0.0048 | 0.0039 | 0.0033 | 0.0063 | 0.007 | 0.0059 | 0.0072 | 0.0065 | 0.0048 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 7.5164 | 8.9589 | 4.6535 | 10.2643 | 7.1466 | 5.0081 | 8.379 | 11.6162 | 8.6166 | 11.7218 |
Translational Efficiency | 1.1025 | 0.7451 | 1.4059 | 0.5064 | 0.848 | 2.0692 | 1.0718 | 0.7692 | 1.0147 | 1.0173 |
Dataset | Hit |
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Protein Concentration | ✔ |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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