Standard name | |
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Human Ortholog | |
Description | Cochaperone protein; regulates activity of adenylyl cyclase Cyr1p; involved in kinetochore complex assembly; associates with the SCF (Skp1p/Cdc53p/F box protein) ubiquitin ligase complex; acts as a linker between Skp1p and HSP90 complexes; protein abundance increases in response to DNA replication stress |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 1 | 0 | 0 | 1 |
Bud | 1 | 0 | 0 | 1 | 1 | 2 | 6 | 2 | 3 | 7 | 3 | 2 | 1 | 0 | 0 | 0 | 0 | 0 | 6 | 8 | 3 | 7 | 17 | 21 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 2 | 1 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 0 | 0 | 3 | 2 | 1 | 3 | 5 | 4 | 13 | 9 | 9 | 9 | 0 | 4 | 2 | 21 | 15 | 14 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 209 | 170 | 211 | 163 | 230 | 217 | 287 | 242 | 218 | 244 | 196 | 219 | 279 | 218 | 324 | 429 | 396 | 230 | 195 | 144 | 191 | 52 | 114 | 205 |
Endoplasmic Reticulum | 2 | 2 | 0 | 0 | 2 | 2 | 1 | 2 | 8 | 11 | 0 | 7 | 0 | 0 | 0 | 13 | 10 | 4 | 1 | 1 | 0 | 1 | 2 | 1 |
Endosome | 0 | 0 | 1 | 0 | 2 | 0 | 1 | 4 | 0 | 0 | 0 | 1 | 1 | 0 | 1 | 0 | 0 | 0 | 3 | 7 | 4 | 2 | 10 | 4 |
Golgi | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 9 | 4 | 1 | 12 | 21 | 51 | 134 | 101 | 86 | 120 | 121 | 141 | 0 | 0 | 0 | 0 | 0 | 1 | 2 | 0 | 2 | 1 | 2 | 3 |
Nucleus | 56 | 38 | 35 | 3 | 6 | 3 | 10 | 8 | 5 | 14 | 3 | 14 | 2 | 0 | 0 | 16 | 4 | 3 | 70 | 57 | 30 | 100 | 102 | 74 |
Nuclear Periphery | 0 | 0 | 1 | 0 | 0 | 1 | 1 | 0 | 2 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 2 | 2 |
Nucleolus | 1 | 0 | 0 | 1 | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 4 | 1 | 5 | 5 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 12 | 2 | 7 | 4 | 11 | 11 |
Vac/Vac Membrane | 46 | 41 | 29 | 36 | 29 | 21 | 48 | 93 | 76 | 50 | 69 | 45 | 18 | 7 | 7 | 57 | 30 | 15 | 22 | 16 | 17 | 13 | 32 | 32 |
Unique Cell Count | 295 | 228 | 256 | 197 | 268 | 260 | 427 | 387 | 353 | 396 | 338 | 384 | 295 | 223 | 328 | 470 | 417 | 243 | 323 | 245 | 270 | 188 | 308 | 368 |
Labelled Cell Count | 326 | 255 | 281 | 219 | 292 | 300 | 496 | 457 | 411 | 457 | 403 | 440 | 301 | 229 | 335 | 536 | 459 | 268 | 323 | 245 | 270 | 188 | 308 | 368 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 6.2 | 9.0 | 8.0 | 7.0 | 7.0 | 6.7 | 6.7 | 6.7 | 6.8 | 6.9 | 6.6 | 6.5 | 9.4 | 9.9 | 10.1 | 15.7 | 14.8 | 15.2 | 9.1 | 9.8 | 10.4 |
Std Deviation (1e-4) | 1.0 | 1.4 | 1.2 | 0.9 | 1.3 | 1.3 | 1.4 | 1.4 | 1.4 | 1.6 | 1.5 | 1.7 | 1.7 | 1.3 | 1.4 | 3.0 | 3.1 | 3.4 | 1.3 | 1.6 | 1.6 |
Intensity Change (Log2) | – | – | – | -0.19 | -0.18 | -0.26 | -0.26 | -0.27 | -0.24 | -0.22 | -0.28 | -0.29 | 0.23 | 0.31 | 0.33 | 0.97 | 0.88 | 0.93 | 0.18 | 0.28 | 0.37 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 1.9 | 0 | 1.3 | 0 | 0 | 0 | 0 | 2.4 | 1.9 | 2.8 |
Cytoplasm | 0.1 | 1.1 | 0.3 | -4.3 | -5.4 | -5.5 | -5.6 | -6.3 | -6.7 | 4.5 | 5.5 | 7.1 | 3.5 | 5.3 | 4.3 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 3.6 | 4.2 | 7.3 | 9.8 | 8.7 | 8.3 | 9.6 | 10.6 | 10.8 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleus | -4.6 | -4.9 | -5.4 | -5.8 | -5.8 | -6.0 | -4.8 | -6.3 | -4.7 | -6.1 | -5.7 | -6.9 | -5.2 | -6.9 | -5.2 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | 2.1 | -0.2 | -1.2 | 0 | 4.0 | 3.3 | 0.5 | 3.0 | 0.2 | -2.2 | -3.4 | -4.6 | 0.3 | -1.8 | -2.0 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 3.8333 | 4.7922 | 4.3011 | 4.0184 | 3.806 | 4.3754 | 5.5591 | 6.3999 | 5.8165 | 4.6619 | 5.5943 | 5.9142 | 3.9427 | 5.0433 | 4.6485 | 4.1749 | 3.9586 | 4.4021 |
Actin | 0.0081 | 0.0041 | 0.004 | 0.0009 | 0.0186 | 0.0022 | 0.0151 | 0.0011 | 0.0248 | 0.0014 | 0.0124 | 0.0069 | 0.0008 | 0.001 | 0.004 | 0.0166 | 0.0108 | 0.0014 |
Bud | 0.0011 | 0.011 | 0.0048 | 0.001 | 0.0053 | 0.0011 | 0.0021 | 0.0016 | 0.0012 | 0.0003 | 0.0011 | 0.0011 | 0.0002 | 0.0005 | 0.001 | 0.0003 | 0.0006 | 0.0014 |
Bud Neck | 0.0012 | 0.0017 | 0.0012 | 0.0008 | 0.0017 | 0.0054 | 0.0064 | 0.0007 | 0.0059 | 0.0019 | 0.0028 | 0.0065 | 0.0009 | 0.0039 | 0.0012 | 0.0007 | 0.0027 | 0.0055 |
Bud Periphery | 0.0005 | 0.0024 | 0.001 | 0.0004 | 0.0057 | 0.0004 | 0.0024 | 0.0009 | 0.0013 | 0.0001 | 0.0016 | 0.0012 | 0.0001 | 0.0001 | 0.0004 | 0.0001 | 0.0004 | 0.0007 |
Bud Site | 0.0034 | 0.0215 | 0.0018 | 0.0003 | 0.0017 | 0.0006 | 0.0056 | 0.003 | 0.0059 | 0.0006 | 0.0035 | 0.0008 | 0.0003 | 0.015 | 0.0024 | 0.0004 | 0.0023 | 0.0021 |
Cell Periphery | 0.0001 | 0.0002 | 0.0001 | 0 | 0.0001 | 0 | 0.0003 | 0.0001 | 0.0002 | 0 | 0.0003 | 0.0001 | 0 | 0.0001 | 0.0001 | 0 | 0.0002 | 0.0001 |
Cytoplasm | 0.5045 | 0.755 | 0.8296 | 0.9172 | 0.8194 | 0.5795 | 0.4709 | 0.8945 | 0.8128 | 0.8475 | 0.6797 | 0.6588 | 0.6453 | 0.8608 | 0.9164 | 0.8566 | 0.8424 | 0.691 |
Cytoplasmic Foci | 0.0222 | 0.0099 | 0.012 | 0.0108 | 0.016 | 0.0115 | 0.0153 | 0.0043 | 0.0078 | 0.0167 | 0.0118 | 0.0055 | 0.0027 | 0.009 | 0.0045 | 0.0072 | 0.0185 | 0.0085 |
Eisosomes | 0.0001 | 0 | 0 | 0 | 0 | 0 | 0.0001 | 0 | 0.0002 | 0 | 0.0001 | 0.0001 | 0 | 0 | 0 | 0.0001 | 0.0001 | 0 |
Endoplasmic Reticulum | 0.0037 | 0.0032 | 0.0036 | 0.0027 | 0.003 | 0.003 | 0.0056 | 0.0028 | 0.004 | 0.0044 | 0.0067 | 0.0036 | 0.0055 | 0.0036 | 0.0032 | 0.0044 | 0.0103 | 0.0033 |
Endosome | 0.0162 | 0.0062 | 0.0063 | 0.0048 | 0.0055 | 0.0086 | 0.0267 | 0.0034 | 0.0109 | 0.0083 | 0.0362 | 0.0087 | 0.0032 | 0.0032 | 0.003 | 0.0059 | 0.0327 | 0.0036 |
Golgi | 0.0018 | 0.0003 | 0.0004 | 0.0002 | 0.005 | 0.0011 | 0.0044 | 0.0003 | 0.0037 | 0.0038 | 0.0073 | 0.0021 | 0.0001 | 0.0002 | 0.0003 | 0.0005 | 0.0069 | 0.0002 |
Lipid Particles | 0.0018 | 0.0001 | 0.0002 | 0.0001 | 0.003 | 0.0012 | 0.0023 | 0.0001 | 0.0051 | 0.0005 | 0.0226 | 0.0017 | 0 | 0.0001 | 0.0001 | 0.0003 | 0.0046 | 0.0001 |
Mitochondria | 0.0029 | 0.0009 | 0.0007 | 0.0007 | 0.0013 | 0.0009 | 0.0035 | 0.0012 | 0.0034 | 0.001 | 0.0146 | 0.0061 | 0.0006 | 0.0003 | 0.0004 | 0.001 | 0.0008 | 0.001 |
None | 0.0359 | 0.0264 | 0.0395 | 0.0191 | 0.0393 | 0.0195 | 0.0152 | 0.0065 | 0.0119 | 0.0139 | 0.0069 | 0.0079 | 0.0151 | 0.01 | 0.0101 | 0.0144 | 0.0119 | 0.0092 |
Nuclear Periphery | 0.008 | 0.0086 | 0.005 | 0.0044 | 0.0025 | 0.0095 | 0.0183 | 0.0042 | 0.0082 | 0.0039 | 0.042 | 0.0079 | 0.0073 | 0.0061 | 0.0038 | 0.0147 | 0.0082 | 0.007 |
Nucleolus | 0.0009 | 0.0007 | 0.0003 | 0.0005 | 0.0004 | 0.0014 | 0.0014 | 0.0003 | 0.0006 | 0.0001 | 0.0032 | 0.0009 | 0.0004 | 0.0002 | 0.0002 | 0.0002 | 0.0007 | 0.0006 |
Nucleus | 0.3702 | 0.1379 | 0.0795 | 0.0236 | 0.0302 | 0.3306 | 0.388 | 0.0706 | 0.0808 | 0.0822 | 0.1168 | 0.2695 | 0.3126 | 0.0808 | 0.04 | 0.0689 | 0.0244 | 0.2479 |
Peroxisomes | 0.0064 | 0.0005 | 0.0023 | 0.0003 | 0.0277 | 0.0016 | 0.0018 | 0.0003 | 0.0032 | 0.0101 | 0.005 | 0.0019 | 0.0001 | 0.0002 | 0.0002 | 0.0003 | 0.0015 | 0.0003 |
Punctate Nuclear | 0.0078 | 0.0054 | 0.0052 | 0.0094 | 0.0124 | 0.0188 | 0.0094 | 0.002 | 0.0055 | 0.0021 | 0.0151 | 0.0054 | 0.0024 | 0.0025 | 0.0074 | 0.0049 | 0.0149 | 0.0137 |
Vacuole | 0.0029 | 0.0034 | 0.002 | 0.0022 | 0.0009 | 0.0025 | 0.0038 | 0.0017 | 0.0019 | 0.0009 | 0.0074 | 0.0026 | 0.0022 | 0.002 | 0.0012 | 0.0019 | 0.0046 | 0.002 |
Vacuole Periphery | 0.0005 | 0.0006 | 0.0003 | 0.0005 | 0.0002 | 0.0005 | 0.0014 | 0.0004 | 0.0006 | 0.0002 | 0.0029 | 0.0008 | 0.0003 | 0.0003 | 0.0002 | 0.0005 | 0.0005 | 0.0004 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 31.5789 | 26.5691 | 20.9476 | 26.3265 | 20.4717 | 32.4897 | 29.8022 | 26.3471 | 30.02 | 32.5903 |
Translational Efficiency | 1.0384 | 1.3326 | 1.5395 | 1.1932 | 1.4232 | 1.1125 | 1.2672 | 1.3461 | 1.294 | 1.1433 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✔ |
Gene Expression | ✘ |
Translational Efficiency | ✔ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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