Standard name | |
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Human Ortholog | |
Description | Putative serine/threonine protein kinase; involved in the adaptation to low concentrations of glucose independent of the SNF3 regulated pathway; SKS1 has a paralog, VHS1, that arose from the whole genome duplication |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 7 | 1 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | – | 0 | 1 | 0 | 0 | 2 | 0 |
Bud | 0 | 1 | 6 | 0 | 4 | 1 | 2 | 3 | 2 | 2 | 3 | 3 | 1 | 2 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 3 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 1 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – | – |
Cell Periphery | 0 | 7 | 4 | 2 | 7 | 6 | 12 | 17 | 18 | 15 | 14 | 31 | 1 | 6 | 0 | 2 | 1 | – | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 161 | 292 | 241 | 165 | 354 | 406 | 418 | 448 | 310 | 296 | 181 | 242 | 291 | 567 | 641 | 91 | 41 | – | 154 | 286 | 227 | 99 | 288 | 255 |
Endoplasmic Reticulum | 0 | 2 | 0 | 1 | 2 | 0 | 17 | 17 | 9 | 12 | 4 | 18 | 0 | 1 | 1 | 4 | 1 | – | 0 | 0 | 1 | 0 | 1 | 1 |
Endosome | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | – | 0 | 2 | 0 | 1 | 2 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | – | 0 | 1 | 0 | 0 | 1 | 2 |
Mitochondria | 2 | 3 | 2 | 5 | 25 | 78 | 117 | 113 | 145 | 199 | 119 | 151 | 1 | 1 | 3 | 1 | 3 | – | 1 | 1 | 3 | 0 | 1 | 1 |
Nucleus | 0 | 2 | 0 | 0 | 1 | 2 | 1 | 5 | 0 | 2 | 2 | 2 | 0 | 1 | 0 | 1 | 2 | – | 0 | 0 | 0 | 0 | 1 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 2 | 0 | 5 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 1 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 1 |
Vac/Vac Membrane | 0 | 0 | 0 | 1 | 6 | 4 | 13 | 19 | 6 | 36 | 17 | 8 | 0 | 1 | 1 | 1 | 0 | – | 0 | 3 | 4 | 1 | 5 | 5 |
Unique Cell Count | 162 | 297 | 241 | 170 | 369 | 436 | 522 | 562 | 417 | 465 | 280 | 373 | 293 | 571 | 644 | 92 | 41 | 158 | 302 | 241 | 106 | 313 | 281 | |
Labelled Cell Count | 163 | 307 | 253 | 175 | 399 | 497 | 582 | 628 | 498 | 568 | 341 | 458 | 295 | 579 | 647 | 100 | 48 | 158 | 302 | 241 | 106 | 313 | 281 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 6.6 | 7.5 | 6.8 | 6.2 | 6.0 | 5.8 | 5.6 | 6.1 | 6.2 | 6.1 | 6.3 | 6.3 | 7.2 | 6.7 | 6.2 | 7.6 | 8.9 | – | 6.5 | 6.8 | 7.0 |
Std Deviation (1e-4) | 0.7 | 0.9 | 0.9 | 1.1 | 1.3 | 1.1 | 1.0 | 1.1 | 1.3 | 1.5 | 1.5 | 1.5 | 1.3 | 1.1 | 1.1 | 1.5 | 1.8 | – | 1.0 | 1.4 | 1.8 |
Intensity Change (Log2) | – | – | – | -0.15 | -0.19 | -0.24 | -0.29 | -0.16 | -0.15 | -0.17 | -0.11 | -0.11 | 0.08 | -0.04 | -0.14 | 0.14 | 0.39 | – | -0.09 | -0.01 | 0.04 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – |
Cell Periphery | 0 | 0 | 0 | 0.6 | 1.1 | 1.8 | 1.2 | 2.1 | 3.5 | 0 | 0 | 0 | 0 | 0 | – |
Cytoplasm | -2.7 | -3.2 | -4.2 | -7.5 | -7.5 | -8.6 | -10.7 | -10.3 | -10.4 | -1.3 | -1.3 | -1.1 | -1.6 | 0 | – |
Endoplasmic Reticulum | 0 | 0 | 0 | 2.8 | 2.7 | 0 | 0 | 0 | 3.5 | 0 | 0 | 0 | 0 | 0 | – |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – |
Mitochondria | 0 | 3.5 | 6.6 | 7.6 | 7.1 | 10.1 | 11.7 | 11.2 | 11.1 | 0 | 0 | 0 | 0 | 0 | – |
Nucleus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – |
Vacuole | 0 | 0 | 0 | 0 | 2.9 | 0 | 4.4 | 3.9 | 0 | 0 | 0 | 0 | 0 | 0 | – |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 3.5763 | 5.2177 | 4.0087 | 3.7411 | 3.5059 | 4.5849 | 3.9924 | 5.6209 | 5.328 | 5.1419 | 4.5187 | 5.4468 | 5.3429 | 7.237 | 6.5043 | 6.0513 | 6.9986 | 6.4983 |
Actin | 0.0017 | 0.0031 | 0.0035 | 0.0015 | 0.0015 | 0.0019 | 0.0603 | 0.0012 | 0.0091 | 0.0066 | 0.0053 | 0.0107 | 0.1091 | 0.0024 | 0.0292 | 0.0109 | 0.0511 | 0.0007 |
Bud | 0.0001 | 0.0069 | 0.0002 | 0.0003 | 0.0002 | 0.0003 | 0.0006 | 0.0004 | 0.0004 | 0.0004 | 0.0002 | 0.0004 | 0.0019 | 0.0002 | 0.0114 | 0.0008 | 0.0084 | 0.0002 |
Bud Neck | 0.0002 | 0.0003 | 0.0004 | 0.0006 | 0.0005 | 0.0011 | 0.0126 | 0.0002 | 0.0009 | 0.0076 | 0.0007 | 0.001 | 0.0126 | 0.0002 | 0.0053 | 0.0004 | 0.032 | 0.0008 |
Bud Periphery | 0 | 0.0046 | 0.0001 | 0.0001 | 0 | 0.0002 | 0.0007 | 0.0001 | 0.0006 | 0.0004 | 0.0001 | 0.0005 | 0.0022 | 0.0001 | 0.0095 | 0.0008 | 0.0071 | 0.0001 |
Bud Site | 0.0006 | 0.0144 | 0.0018 | 0.0002 | 0.0004 | 0.0002 | 0.0133 | 0.002 | 0.0028 | 0.0014 | 0.0017 | 0.0002 | 0.0105 | 0.0031 | 0.0088 | 0.0008 | 0.0056 | 0.0002 |
Cell Periphery | 0.0002 | 0.0007 | 0.0002 | 0.0001 | 0.0001 | 0.0001 | 0.0005 | 0.0001 | 0.0002 | 0.0005 | 0.0001 | 0.0001 | 0.0007 | 0.0003 | 0.0006 | 0.0002 | 0.0002 | 0 |
Cytoplasm | 0.9641 | 0.9495 | 0.956 | 0.9678 | 0.9195 | 0.9556 | 0.7261 | 0.9209 | 0.8936 | 0.9292 | 0.8641 | 0.9374 | 0.6608 | 0.9845 | 0.8551 | 0.8987 | 0.7898 | 0.9798 |
Cytoplasmic Foci | 0.0034 | 0.0077 | 0.0049 | 0.0037 | 0.0367 | 0.0132 | 0.0399 | 0.0133 | 0.0249 | 0.0116 | 0.023 | 0.0052 | 0.0569 | 0.0029 | 0.0102 | 0.006 | 0.0201 | 0.007 |
Eisosomes | 0 | 0 | 0 | 0 | 0.0001 | 0 | 0.0013 | 0 | 0.0001 | 0.0004 | 0.0001 | 0.0006 | 0.0005 | 0 | 0.0001 | 0.0001 | 0.0002 | 0 |
Endoplasmic Reticulum | 0.0132 | 0.0037 | 0.0089 | 0.0067 | 0.0019 | 0.0034 | 0.0035 | 0.0019 | 0.0031 | 0.0022 | 0.0039 | 0.0025 | 0.0094 | 0.0009 | 0.0051 | 0.0045 | 0.0017 | 0.0019 |
Endosome | 0.0021 | 0.002 | 0.0046 | 0.0048 | 0.0114 | 0.0038 | 0.0216 | 0.0091 | 0.011 | 0.0121 | 0.0283 | 0.0071 | 0.0189 | 0.0007 | 0.0072 | 0.0191 | 0.0045 | 0.0021 |
Golgi | 0.0004 | 0.0005 | 0.0004 | 0.0003 | 0.0009 | 0.0018 | 0.0106 | 0.0027 | 0.0067 | 0.0025 | 0.0042 | 0.0051 | 0.0145 | 0.0004 | 0.0053 | 0.0081 | 0.0055 | 0.0004 |
Lipid Particles | 0.0002 | 0.0004 | 0.0003 | 0.0001 | 0.0074 | 0.0003 | 0.0063 | 0.0001 | 0.0072 | 0.0035 | 0.0175 | 0.0045 | 0.0096 | 0 | 0.0032 | 0.0228 | 0.0418 | 0 |
Mitochondria | 0.0001 | 0.0001 | 0.0002 | 0.0002 | 0.0004 | 0.0052 | 0.0094 | 0.0116 | 0.0075 | 0.0014 | 0.0021 | 0.0113 | 0.0038 | 0.0001 | 0.0137 | 0.009 | 0.0026 | 0.0002 |
None | 0.0071 | 0.0027 | 0.0105 | 0.0045 | 0.012 | 0.0083 | 0.0353 | 0.031 | 0.0144 | 0.0135 | 0.0114 | 0.0077 | 0.0222 | 0.0032 | 0.0157 | 0.0025 | 0.0048 | 0.0047 |
Nuclear Periphery | 0.0028 | 0.0007 | 0.0027 | 0.0025 | 0.0005 | 0.0006 | 0.0073 | 0.0005 | 0.0012 | 0.0006 | 0.0031 | 0.0017 | 0.006 | 0.0002 | 0.0031 | 0.0047 | 0.0007 | 0.0002 |
Nucleolus | 0 | 0 | 0 | 0 | 0.0001 | 0 | 0.0009 | 0 | 0.0003 | 0.0005 | 0.0045 | 0.0001 | 0.0029 | 0 | 0.0007 | 0.0002 | 0.0001 | 0 |
Nucleus | 0.0022 | 0.0012 | 0.0017 | 0.0036 | 0.0011 | 0.0015 | 0.0047 | 0.0017 | 0.0009 | 0.0012 | 0.0041 | 0.0008 | 0.0075 | 0.0005 | 0.002 | 0.0012 | 0.0007 | 0.0007 |
Peroxisomes | 0.0001 | 0.0001 | 0.0001 | 0 | 0.0019 | 0.0009 | 0.0122 | 0.0017 | 0.0082 | 0.0017 | 0.0055 | 0.0015 | 0.0272 | 0.0001 | 0.0086 | 0.0054 | 0.0207 | 0.0004 |
Punctate Nuclear | 0.0004 | 0.0003 | 0.0004 | 0.0009 | 0.001 | 0.0003 | 0.0309 | 0.0002 | 0.0036 | 0.0006 | 0.0179 | 0.0008 | 0.0204 | 0.0001 | 0.0039 | 0.0019 | 0.0018 | 0.0002 |
Vacuole | 0.0008 | 0.001 | 0.0025 | 0.0016 | 0.002 | 0.001 | 0.0013 | 0.0008 | 0.0025 | 0.0017 | 0.0015 | 0.0005 | 0.002 | 0.0002 | 0.0006 | 0.001 | 0.0004 | 0.0002 |
Vacuole Periphery | 0.0001 | 0.0001 | 0.0004 | 0.0005 | 0.0003 | 0.0002 | 0.0005 | 0.0002 | 0.0006 | 0.0003 | 0.0005 | 0.0003 | 0.0005 | 0 | 0.0003 | 0.001 | 0.0002 | 0 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 7.3122 | 11.1123 | 8.2458 | 24.1423 | 10.4286 | 8.7697 | 13.5488 | 19.8503 | 24.5654 | 16.3275 |
Translational Efficiency | 0.9349 | 0.5713 | 0.9121 | 0.5023 | 0.5677 | 1.2545 | 0.8474 | 0.5433 | 0.6721 | 0.6385 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✔ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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