Standard name | |
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Human Ortholog | |
Description | Subunit of Golgi mannosyltransferase complex; this complex mediates elongation of the polysaccharide mannan backbone; forms a separate complex with Van1p that is also involved in backbone elongation; this complex also contains Anp1p, Mnn10p, Mnn11p, and Hoc1p |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 2 | 3 | 4 | 0 | 1 | 7 | 0 | 0 | – | 8 | 6 | 10 | – | – | – | 7 | 6 | 3 | 2 | 15 | 10 | 0 | 0 | 0 |
Bud | 0 | 7 | 24 | 3 | 25 | 61 | 52 | 70 | – | 35 | 54 | 60 | – | – | – | 10 | 11 | 8 | 0 | 1 | 1 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | – | 0 | 0 | 0 | – | – | – | 0 | 3 | 0 | 0 | 1 | 1 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 5 | 7 | 6 | 5 | – | 6 | 13 | 10 | – | – | – | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 0 | 1 | 0 | 3 | 3 | 4 | 2 | 3 | – | 2 | 3 | 3 | – | – | – | 1 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 8 | 25 | 32 | 42 | 27 | 41 | 41 | 48 | – | 29 | 16 | 31 | – | – | – | 29 | 40 | 24 | 2 | 1 | 6 | 0 | 0 | 0 |
Endoplasmic Reticulum | 1 | 2 | 1 | 2 | 0 | 6 | 2 | 2 | – | 2 | 1 | 11 | – | – | – | 11 | 8 | 10 | 0 | 1 | 3 | 0 | 0 | 0 |
Endosome | 6 | 77 | 125 | 102 | 223 | 137 | 224 | 313 | – | 220 | 57 | 89 | – | – | – | 161 | 210 | 177 | 34 | 112 | 154 | 0 | 0 | 0 |
Golgi | 1 | 23 | 7 | 11 | 4 | 8 | 10 | 18 | – | 43 | 45 | 73 | – | – | – | 146 | 77 | 133 | 24 | 109 | 208 | 0 | 0 | 0 |
Mitochondria | 21 | 95 | 253 | 76 | 213 | 604 | 602 | 445 | – | 466 | 594 | 689 | – | – | – | 149 | 73 | 74 | 8 | 44 | 46 | 0 | 0 | 0 |
Nucleus | 1 | 0 | 3 | 1 | 0 | 3 | 5 | 4 | – | 1 | 0 | 2 | – | – | – | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | – | 1 | 1 | 0 | – | – | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 3 | 0 | 5 | 1 | 5 | 16 | 24 | 12 | – | 12 | 9 | 15 | – | – | – | 1 | 4 | 3 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 9 | 80 | 43 | 135 | 124 | 247 | 291 | – | 227 | 109 | 151 | – | – | – | 26 | 60 | 67 | 1 | 14 | 66 | 0 | 0 | 0 |
SpindlePole | 1 | 10 | 33 | 19 | 53 | 56 | 108 | 152 | – | 95 | 47 | 61 | – | – | – | 68 | 79 | 65 | 2 | 4 | 6 | 0 | 0 | 0 |
Vac/Vac Membrane | 3 | 11 | 5 | 1 | 7 | 7 | 17 | 18 | – | 18 | 8 | 12 | – | – | – | 12 | 15 | 12 | 2 | 8 | 2 | 0 | 0 | 0 |
Unique Cell Count | 38 | 212 | 439 | 245 | 478 | 816 | 959 | 923 | 814 | 710 | 889 | 473 | 458 | 445 | 83 | 323 | 516 | 2 | 1 | 1 | ||||
Labelled Cell Count | 47 | 263 | 573 | 305 | 701 | 1081 | 1341 | 1382 | 1165 | 963 | 1217 | 622 | 588 | 579 | 83 | 323 | 516 | 2 | 1 | 1 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 5.7 | 6.6 | 5.7 | 6.1 | 5.7 | 5.2 | 5.2 | 5.8 | – | 5.8 | 5.6 | 5.8 | – | – | – | 6.9 | 6.8 | 7.1 | – | – | – |
Std Deviation (1e-4) | 1.6 | 1.4 | 1.6 | 1.8 | 1.7 | 1.3 | 1.7 | 1.8 | – | 1.4 | 1.3 | 1.5 | – | – | – | 0.8 | 1.1 | 0.9 | – | – | – |
Intensity Change (Log2) | – | – | – | 0.1 | 0.01 | -0.11 | -0.12 | 0.03 | – | 0.03 | -0.01 | 0.04 | – | – | – | 0.28 | 0.26 | 0.33 | – | – | – |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | – | – | – | 0.8 | 0 | 0 |
Bud | -2.7 | -0.2 | 1.4 | 0 | 1.4 | – | -0.9 | 1.4 | 0.9 | – | – | – | -2.7 | -2.4 | -2.9 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | – | – | – | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | – | – | – | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | – | – | – | 0 | 0 | 0 |
Cytoplasm | 4.0 | -1.0 | -1.6 | -2.4 | -1.5 | – | -2.9 | -4.1 | -3.1 | – | – | – | -0.7 | 0.8 | -1.2 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | – | – | – | 2.8 | 0 | 2.7 |
Endosome | 3.5 | 5.7 | -4.9 | -2.1 | 2.0 | – | -0.5 | -9.2 | -8.6 | – | – | – | 1.8 | 5.4 | 3.5 |
Golgi | 2.3 | -1.1 | -1.0 | -0.9 | 0.5 | – | 3.2 | 3.8 | 4.8 | – | – | – | 11.8 | 7.8 | 11.5 |
Mitochondria | -6.7 | -4.0 | 5.9 | 1.8 | -3.3 | – | -0.1 | 9.7 | 7.5 | – | – | – | -7.9 | -13.0 | -12.6 |
Nucleus | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | – | – | – | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | – | – | – | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 1.1 | 1.7 | 0.3 | – | 0.5 | 0.2 | 0.8 | – | – | – | 0 | 0 | 0 |
Peroxisomes | -0.2 | 3.6 | -1.4 | 3.1 | 5.2 | – | 3.8 | -1.3 | -0.6 | – | – | – | -6.0 | -2.1 | -1.3 |
SpindlePole | 0.1 | 1.9 | -0.4 | 2.2 | 4.5 | – | 2.3 | -0.6 | -0.4 | – | – | – | 3.3 | 4.4 | 3.4 |
Vacuole | 0 | 0.4 | 0 | 0.9 | 1.1 | – | 1.3 | 0 | 0.3 | – | – | – | 1.6 | 2.2 | 1.7 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Actin | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud Neck | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud Periphery | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud Site | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cell Periphery | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cytoplasm | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cytoplasmic Foci | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Eisosomes | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Endoplasmic Reticulum | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Endosome | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Golgi | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Lipid Particles | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Mitochondria | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
None | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nuclear Periphery | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nucleolus | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nucleus | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Peroxisomes | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Punctate Nuclear | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Vacuole | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Vacuole Periphery | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 99.3807 | 54.7987 | 76.3971 | 72.1371 | 89.7143 | 86.3298 | 69.4685 | 77.6249 | 61.223 | 90.3639 |
Translational Efficiency | 1.0299 | 1.2556 | 0.8091 | 0.8669 | 0.732 | 0.97 | 0.9247 | 0.6684 | 0.8978 | 0.7037 |
Dataset | Hit |
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Protein Concentration | – |
Protein Localization | – |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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