Standard name | |
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Human Ortholog | |
Description | Delta adaptin-like subunit of the clathrin associated protein complex; functions in transport of alkaline phosphatase to the vacuole via the alternate pathway; suppressor of loss of casein kinase 1 function; the clathrin associated protein complex is also known as AP-3 |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 43 | 31 | 9 | 10 | 13 | 14 | 15 | 40 | 30 | 14 | 21 | 27 | 38 | 43 | 38 | 22 | 47 | 42 | 19 | 8 | 32 | 15 | 28 | 33 |
Bud | 11 | 6 | 13 | 11 | 15 | 11 | 45 | 50 | 59 | 35 | 54 | 74 | 4 | 4 | 3 | 9 | 18 | 12 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 3 | 6 | 7 | 8 | 6 | 0 | 0 | 0 | 0 | 1 | 0 | – | – | – | – | – | – |
Cell Periphery | 0 | 1 | 0 | 1 | 2 | 1 | 4 | 3 | 8 | 1 | 4 | 4 | 4 | 4 | 1 | 1 | 2 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 3 | 5 | 7 | 10 | 11 | 8 | 10 | 13 | 6 | 10 | 11 | 8 | 13 | 13 | 11 | 30 | 62 | 26 | 0 | 1 | 0 | 0 | 0 | 2 |
Endoplasmic Reticulum | 10 | 16 | 9 | 3 | 7 | 22 | 20 | 16 | 15 | 11 | 10 | 14 | 32 | 26 | 28 | 11 | 12 | 13 | 0 | 0 | 0 | 1 | 3 | 2 |
Endosome | 64 | 0 | 62 | 39 | 69 | 56 | 120 | 151 | 44 | 37 | 22 | 76 | 28 | 28 | 31 | 56 | 183 | 87 | 67 | 34 | 47 | 43 | 66 | 60 |
Golgi | 224 | 42 | 168 | 81 | 142 | 39 | 55 | 53 | 35 | 15 | 21 | 26 | 108 | 116 | 150 | 74 | 215 | 186 | 296 | 99 | 253 | 221 | 398 | 454 |
Mitochondria | 149 | 130 | 194 | 187 | 279 | 397 | 534 | 590 | 474 | 632 | 456 | 510 | 39 | 39 | 17 | 23 | 46 | 34 | 6 | 16 | 7 | 13 | 16 | 13 |
Nucleus | 0 | 2 | 0 | 0 | 2 | 1 | 0 | 3 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 3 | 2 | 0 | 1 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 5 | 1 | 1 | 3 | 5 | 8 | 3 | 9 | 3 | 3 | 2 | 3 | 0 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
Nucleolus | 3 | 0 | 4 | 3 | 7 | 6 | 32 | 49 | 14 | 26 | 11 | 14 | 2 | 2 | 3 | 0 | 11 | 5 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 3 | 0 | 9 | 15 | 22 | 17 | 57 | 65 | 43 | 42 | 22 | 79 | 2 | 3 | 0 | 1 | 24 | 6 | 12 | 4 | 22 | 17 | 23 | 27 |
SpindlePole | 4 | 0 | 3 | 1 | 7 | 5 | 16 | 28 | 23 | 21 | 14 | 30 | 6 | 6 | 7 | 15 | 50 | 16 | 0 | 1 | 0 | 1 | 1 | 0 |
Vac/Vac Membrane | 24 | 7 | 5 | 3 | 10 | 12 | 13 | 11 | 3 | 5 | 3 | 15 | 20 | 20 | 27 | 13 | 52 | 30 | 2 | 7 | 1 | 0 | 1 | 2 |
Unique Cell Count | 361 | 158 | 344 | 259 | 435 | 497 | 733 | 854 | 570 | 717 | 520 | 694 | 201 | 203 | 236 | 209 | 566 | 345 | 407 | 178 | 368 | 316 | 545 | 601 |
Labelled Cell Count | 538 | 240 | 488 | 365 | 587 | 593 | 927 | 1083 | 763 | 865 | 661 | 886 | 298 | 307 | 316 | 256 | 727 | 461 | 407 | 178 | 368 | 316 | 545 | 601 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 10.4 | 8.1 | 10.7 | 10.0 | 9.6 | 8.4 | 8.1 | 8.1 | 7.8 | 7.0 | 7.5 | 7.5 | 9.9 | 9.9 | 10.9 | 8.1 | 9.2 | 11.0 | 11.8 | 12.1 | 12.5 |
Std Deviation (1e-4) | 1.4 | 1.4 | 1.8 | 1.5 | 1.6 | 1.5 | 1.5 | 1.7 | 1.7 | 1.5 | 1.7 | 1.6 | 1.4 | 1.4 | 1.2 | 1.4 | 1.7 | 2.1 | 1.5 | 1.7 | 1.8 |
Intensity Change (Log2) | – | – | – | -0.09 | -0.15 | -0.34 | -0.39 | -0.4 | -0.45 | -0.61 | -0.52 | -0.5 | -0.1 | -0.1 | 0.03 | -0.4 | -0.22 | 0.05 | 0.15 | 0.18 | 0.24 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0.9 | 0.3 | 0.2 | -0.6 | 1.6 | 1.9 | -0.7 | 1.1 | 1.1 | 6.5 | 7.2 | 5.8 | 3.9 | 3.5 | 4.8 |
Bud | 0.3 | -0.2 | -1.3 | 1.6 | 1.5 | 3.6 | 0.8 | 3.6 | 3.8 | -1.2 | -1.2 | -1.8 | 0.3 | -0.5 | -0.2 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 1.3 | 0.5 | -0.5 | -0.8 | -0.6 | 0 | -0.8 | 0.1 | 0 | 2.7 | 2.6 | 1.8 | 5.6 | 4.9 | 3.4 |
Endoplasmic Reticulum | -1.3 | -1.0 | 1.4 | 0.1 | -0.8 | 0 | -1.2 | -0.7 | -0.6 | 5.7 | 4.7 | 4.5 | 1.6 | -0.5 | 0.9 |
Endosome | -1.0 | -0.8 | -2.8 | -0.7 | -0.1 | -4.7 | -6.7 | -6.7 | -3.2 | -1.2 | -1.3 | -1.6 | 2.4 | 4.7 | 2.3 |
Golgi | -4.3 | -4.6 | -13.6 | -15.6 | -17.2 | -15.0 | -18.9 | -15.6 | -17.5 | 1.1 | 1.9 | 3.5 | -3.1 | -3.2 | 1.3 |
Mitochondria | 4.0 | 2.2 | 7.3 | 5.4 | 4.2 | 8.8 | 11.7 | 10.4 | 5.5 | -8.4 | -8.5 | -12.1 | -10.6 | -16.0 | -13.0 |
Nucleus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 2.7 | 3.5 | 1.4 | 2.3 | 1.0 | 1.0 | 0 | 0 | 0 | 0 | 0.9 | 0 |
Peroxisomes | 2.0 | 1.7 | 0.7 | 3.3 | 3.2 | 3.1 | 2.3 | 1.2 | 4.8 | 0 | 0 | 0 | 0 | 1.3 | -0.8 |
SpindlePole | 0 | 0 | 0 | 1.5 | 2.4 | 2.8 | 2.1 | 1.9 | 3.0 | 0 | 0 | 0 | 4.1 | 5.0 | 3.0 |
Vacuole | 0 | 0.9 | 1.0 | 0.4 | 0 | 0 | 0 | 0 | 0.8 | 4.6 | 4.5 | 5.2 | 3.1 | 4.7 | 4.3 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 4.8592 | 5.9309 | 5.5265 | 4.9572 | 5.0063 | 5.4714 | 3.7435 | 5.7568 | 5.1423 | 5.1502 | 4.9211 | 5.2809 | 3.7772 | 5.2678 | 4.5532 | 4.2358 | 3.8402 | 4.406 |
Actin | 0.0411 | 0.018 | 0.025 | 0.0013 | 0.0068 | 0.0239 | 0.1025 | 0.0179 | 0.0141 | 0.0024 | 0.0173 | 0.0221 | 0.0216 | 0.0412 | 0.0368 | 0.0151 | 0.0084 | 0.0494 |
Bud | 0.0002 | 0.0005 | 0.0021 | 0.0001 | 0 | 0.0002 | 0.0008 | 0.0004 | 0.0002 | 0.0001 | 0.0001 | 0.0001 | 0.0003 | 0.0003 | 0.0001 | 0.0006 | 0.0003 | 0.0002 |
Bud Neck | 0.0005 | 0.0005 | 0.0008 | 0.0002 | 0.0002 | 0.0008 | 0.004 | 0.0062 | 0.0003 | 0.0001 | 0.0003 | 0.0008 | 0.0005 | 0.0005 | 0.0004 | 0.0004 | 0.0005 | 0.0019 |
Bud Periphery | 0.0001 | 0.0002 | 0.0007 | 0.0001 | 0 | 0.0001 | 0.001 | 0.0004 | 0.0002 | 0 | 0 | 0.0001 | 0.0002 | 0.0001 | 0.0001 | 0.0006 | 0.0001 | 0.0003 |
Bud Site | 0.0011 | 0.0042 | 0.0013 | 0.0001 | 0.0001 | 0.0004 | 0.0219 | 0.0017 | 0.0003 | 0.0002 | 0.0001 | 0.0004 | 0.0006 | 0.005 | 0.0004 | 0.0078 | 0.001 | 0.0004 |
Cell Periphery | 0.0001 | 0 | 0.0001 | 0 | 0 | 0 | 0.0006 | 0.0003 | 0 | 0 | 0 | 0.0001 | 0.0001 | 0.0001 | 0 | 0.0002 | 0 | 0.0001 |
Cytoplasm | 0.0078 | 0.0065 | 0.0028 | 0.0016 | 0.0024 | 0.0018 | 0.0033 | 0.0037 | 0.0034 | 0.0018 | 0.0017 | 0.0012 | 0.0106 | 0.0091 | 0.0092 | 0.0016 | 0.0069 | 0.0017 |
Cytoplasmic Foci | 0.1285 | 0.1394 | 0.1166 | 0.0967 | 0.1012 | 0.0913 | 0.1271 | 0.1293 | 0.1152 | 0.1136 | 0.0761 | 0.0736 | 0.1049 | 0.1378 | 0.1075 | 0.08 | 0.1913 | 0.0902 |
Eisosomes | 0.0001 | 0 | 0 | 0 | 0 | 0 | 0.0002 | 0.0001 | 0.0001 | 0 | 0 | 0 | 0.0001 | 0 | 0.0001 | 0.0002 | 0 | 0.0001 |
Endoplasmic Reticulum | 0.0026 | 0.0007 | 0.0004 | 0.0003 | 0.0003 | 0.0003 | 0.0014 | 0.0006 | 0.0022 | 0.0003 | 0.0005 | 0.0005 | 0.0055 | 0.0005 | 0.0013 | 0.0005 | 0.0015 | 0.0008 |
Endosome | 0.2288 | 0.2404 | 0.2063 | 0.3439 | 0.236 | 0.1775 | 0.1962 | 0.2397 | 0.2504 | 0.2945 | 0.1656 | 0.187 | 0.2496 | 0.2085 | 0.2124 | 0.3027 | 0.2741 | 0.1676 |
Golgi | 0.5209 | 0.5723 | 0.6178 | 0.5415 | 0.5817 | 0.6653 | 0.3886 | 0.5815 | 0.5698 | 0.5348 | 0.7331 | 0.6723 | 0.4093 | 0.5618 | 0.5776 | 0.4688 | 0.4596 | 0.6251 |
Lipid Particles | 0.0169 | 0.0025 | 0.0038 | 0.0022 | 0.0054 | 0.0089 | 0.0519 | 0.0057 | 0.0081 | 0.0083 | 0.0013 | 0.0117 | 0.0424 | 0.0032 | 0.0039 | 0.0068 | 0.0219 | 0.0055 |
Mitochondria | 0.0102 | 0.0044 | 0.0053 | 0.006 | 0.0027 | 0.0101 | 0.0154 | 0.0042 | 0.0087 | 0.0069 | 0.002 | 0.0083 | 0.0069 | 0.004 | 0.0091 | 0.034 | 0.0023 | 0.0245 |
None | 0.0044 | 0.0001 | 0.0002 | 0 | 0.0047 | 0.0003 | 0.0018 | 0.0001 | 0.0008 | 0.0001 | 0 | 0 | 0.0157 | 0.0001 | 0.0117 | 0.0002 | 0.0042 | 0.0001 |
Nuclear Periphery | 0.0012 | 0.0003 | 0.0001 | 0.0001 | 0.0069 | 0.0001 | 0.0137 | 0.0003 | 0.0016 | 0.0001 | 0 | 0.0001 | 0.0303 | 0.0002 | 0.0013 | 0.0001 | 0.0006 | 0.0002 |
Nucleolus | 0.0004 | 0 | 0.0001 | 0 | 0.0007 | 0.0001 | 0.0012 | 0.0001 | 0 | 0 | 0 | 0 | 0.0007 | 0 | 0.0002 | 0.0002 | 0.0001 | 0 |
Nucleus | 0.0005 | 0.0001 | 0.0001 | 0 | 0.0023 | 0.0001 | 0.0052 | 0.0001 | 0.0001 | 0 | 0 | 0 | 0.0093 | 0.0001 | 0.0009 | 0.0002 | 0.0001 | 0.0001 |
Peroxisomes | 0.0284 | 0.0076 | 0.0143 | 0.0014 | 0.0038 | 0.0159 | 0.0512 | 0.0043 | 0.0183 | 0.0328 | 0.001 | 0.0188 | 0.0623 | 0.0212 | 0.0236 | 0.0755 | 0.0218 | 0.029 |
Punctate Nuclear | 0.0018 | 0.0001 | 0.0001 | 0 | 0.0427 | 0.0013 | 0.0027 | 0.0003 | 0.0003 | 0.0004 | 0 | 0.0001 | 0.003 | 0.0001 | 0.0016 | 0.0002 | 0.0029 | 0.0002 |
Vacuole | 0.0027 | 0.0012 | 0.0009 | 0.0017 | 0.0009 | 0.0006 | 0.0045 | 0.0019 | 0.0027 | 0.0017 | 0.0002 | 0.0009 | 0.0125 | 0.0033 | 0.0009 | 0.0021 | 0.0008 | 0.0009 |
Vacuole Periphery | 0.0017 | 0.0011 | 0.001 | 0.0025 | 0.0012 | 0.001 | 0.005 | 0.0013 | 0.0033 | 0.0019 | 0.0006 | 0.0017 | 0.0135 | 0.0029 | 0.001 | 0.0021 | 0.0014 | 0.0015 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 30.1574 | 31.3639 | 30.5953 | 38.1968 | 33.7336 | 27.9737 | 31.8901 | 34.7505 | 35.3375 | 38.1023 |
Translational Efficiency | 0.9632 | 0.6973 | 0.7972 | 0.857 | 0.7211 | 0.907 | 0.725 | 0.5484 | 0.7406 | 0.7208 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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