Standard name | |
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Human Ortholog | |
Description | S-adenosylmethionine-homocysteine methyltransferase; functions along with Mht1p in the conversion of S-adenosylmethionine (AdoMet) to methionine to control the methionine/AdoMet ratio; SAM4 has a paralog, YMR321C, that arose from a single-locus duplication |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 5 | 1 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 3 | 0 | 6 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 4 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 1 | 0 | 1 | 1 | 3 | 3 | 8 | 4 | 7 | 11 | 5 | 8 | 0 | 2 | 3 | 8 | 7 | 8 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 243 | 133 | 127 | 141 | 209 | 222 | 223 | 286 | 178 | 196 | 150 | 176 | 162 | 262 | 279 | 303 | 302 | 219 | 232 | 139 | 129 | 99 | 187 | 234 |
Endoplasmic Reticulum | 0 | 0 | 0 | 2 | 4 | 3 | 11 | 13 | 1 | 2 | 2 | 2 | 1 | 2 | 2 | 13 | 13 | 9 | 1 | 0 | 1 | 0 | 0 | 1 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 1 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 0 | 0 | 0 | 0 | 0 | 1 | 8 | 13 | 30 | 9 | 54 | 21 | 0 | 0 | 0 | 1 | 0 | 2 | 0 | 2 | 0 | 0 | 0 | 0 |
Nucleus | 0 | 0 | 0 | 0 | 0 | 1 | 5 | 3 | 6 | 8 | 5 | 2 | 0 | 0 | 0 | 3 | 0 | 0 | 0 | 1 | 1 | 1 | 0 | 4 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vac/Vac Membrane | 1 | 0 | 0 | 5 | 2 | 9 | 17 | 14 | 30 | 27 | 19 | 24 | 0 | 1 | 1 | 5 | 7 | 1 | 0 | 0 | 1 | 0 | 1 | 1 |
Unique Cell Count | 244 | 133 | 127 | 147 | 215 | 232 | 263 | 329 | 231 | 240 | 216 | 223 | 162 | 265 | 281 | 308 | 313 | 222 | 237 | 151 | 137 | 105 | 192 | 249 |
Labelled Cell Count | 245 | 133 | 128 | 150 | 218 | 239 | 274 | 339 | 258 | 253 | 241 | 240 | 163 | 267 | 285 | 333 | 331 | 240 | 237 | 151 | 137 | 105 | 192 | 249 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 41.0 | 49.2 | 33.7 | 28.6 | 23.6 | 17.5 | 14.0 | 12.7 | 9.9 | 9.9 | 8.3 | 8.4 | 34.2 | 32.9 | 32.3 | 42.7 | 47.0 | 45.3 | 39.5 | 37.2 | 38.8 |
Std Deviation (1e-4) | 7.8 | 12.8 | 8.4 | 6.0 | 4.3 | 4.0 | 3.3 | 2.8 | 2.9 | 2.6 | 3.6 | 2.3 | 8.0 | 8.2 | 7.3 | 13.4 | 15.3 | 17.3 | 9.1 | 8.8 | 8.2 |
Intensity Change (Log2) | – | – | – | -0.23 | -0.51 | -0.94 | -1.27 | -1.41 | -1.77 | -1.77 | -2.02 | -2.01 | 0.02 | -0.03 | -0.06 | 0.34 | 0.48 | 0.43 | 0.23 | 0.14 | 0.21 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | -2.3 | -1.9 | -2.4 | -4.6 | -4.3 | -5.8 | -5.1 | -6.9 | -5.6 | 0 | -1.2 | -1.0 | -1.4 | -2.1 | -1.3 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 0 | 0 | 0 | 0 | 0 | 4.2 | 0 | 6.1 | 3.6 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | 0 | 0 | 0 | 2.9 | 0 | 4.2 | 3.9 | 3.4 | 3.8 | 0 | 0 | 0 | 0 | 0 | 0 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 35.637 | 40.6847 | 40.0102 | 36.905 | 34.5815 | 37.5958 | 42.5058 | 48.5776 | 45.9209 | 46.361 | 42.2346 | 45.7957 | 41.8955 | 48.5491 | 44.2901 | 44.9371 | 45.2412 | 43.5537 |
Actin | 0.0006 | 0.0003 | 0.0001 | 0.0001 | 0 | 0.0006 | 0.0002 | 0.0001 | 0.0002 | 0 | 0.0006 | 0.0001 | 0.0051 | 0.0001 | 0.0004 | 0.0001 | 0.0002 | 0.0004 |
Bud | 0.0004 | 0.0001 | 0 | 0 | 0 | 0.001 | 0.0001 | 0.0003 | 0.0001 | 0 | 0.0003 | 0.0001 | 0.0004 | 0.0001 | 0.0003 | 0 | 0.0001 | 0.0008 |
Bud Neck | 0.0004 | 0.0002 | 0.0002 | 0.0002 | 0.0004 | 0.0008 | 0.0001 | 0.0001 | 0.0002 | 0.0003 | 0.001 | 0.0005 | 0.0011 | 0.0001 | 0.0002 | 0.0002 | 0.0002 | 0.0006 |
Bud Periphery | 0.0002 | 0 | 0 | 0 | 0 | 0.0003 | 0 | 0 | 0 | 0 | 0.0002 | 0 | 0.0005 | 0 | 0 | 0 | 0 | 0.0001 |
Bud Site | 0.0004 | 0.0001 | 0 | 0 | 0 | 0.0003 | 0 | 0.0001 | 0.0001 | 0 | 0.0001 | 0 | 0.0028 | 0.0001 | 0.0001 | 0 | 0 | 0.0001 |
Cell Periphery | 0.0001 | 0.0001 | 0 | 0 | 0 | 0 | 0 | 0.0001 | 0 | 0 | 0.0006 | 0 | 0.0004 | 0.0022 | 0 | 0 | 0 | 0 |
Cytoplasm | 0.9335 | 0.987 | 0.9805 | 0.983 | 0.9726 | 0.9492 | 0.9778 | 0.9901 | 0.982 | 0.9245 | 0.9542 | 0.9671 | 0.9097 | 0.984 | 0.9785 | 0.9743 | 0.9704 | 0.9526 |
Cytoplasmic Foci | 0.0013 | 0.0003 | 0.0002 | 0.0007 | 0.0006 | 0.007 | 0.0005 | 0.0001 | 0.0003 | 0.0001 | 0.0002 | 0.0004 | 0.0009 | 0.0003 | 0.0031 | 0.0002 | 0.0002 | 0.0038 |
Eisosomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.0004 | 0.0001 | 0 | 0 | 0 | 0 |
Endoplasmic Reticulum | 0.0008 | 0.0003 | 0.0004 | 0.0003 | 0.0006 | 0.0007 | 0.0006 | 0.0005 | 0.0004 | 0.0002 | 0.0013 | 0.0006 | 0.0007 | 0.0002 | 0.0002 | 0.0001 | 0.0006 | 0.0007 |
Endosome | 0.0003 | 0.0001 | 0.0001 | 0.0001 | 0.0004 | 0.0003 | 0.0001 | 0 | 0.0001 | 0 | 0.0001 | 0.0002 | 0.0013 | 0.0001 | 0.0001 | 0 | 0.0001 | 0.0009 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.0004 | 0 | 0 | 0 | 0 | 0.0001 |
Lipid Particles | 0.0002 | 0 | 0 | 0 | 0 | 0.0001 | 0 | 0 | 0 | 0 | 0.0001 | 0 | 0.0008 | 0.0003 | 0.0001 | 0 | 0 | 0.0001 |
Mitochondria | 0.0009 | 0.0001 | 0 | 0 | 0 | 0.0021 | 0.0001 | 0 | 0 | 0 | 0 | 0 | 0.0021 | 0.0001 | 0.0002 | 0 | 0.0001 | 0.0005 |
None | 0.0019 | 0.0003 | 0.0001 | 0.0003 | 0.0003 | 0.0014 | 0.0004 | 0.0001 | 0.0003 | 0.0001 | 0.0002 | 0.0002 | 0.0016 | 0.0004 | 0.0009 | 0.0002 | 0.0002 | 0.0011 |
Nuclear Periphery | 0.0071 | 0.0017 | 0.0023 | 0.0018 | 0.0038 | 0.0037 | 0.0025 | 0.0013 | 0.0018 | 0.0042 | 0.0067 | 0.0033 | 0.0066 | 0.0014 | 0.002 | 0.0026 | 0.0046 | 0.0051 |
Nucleolus | 0.0029 | 0 | 0 | 0 | 0 | 0.0006 | 0 | 0 | 0 | 0 | 0.0001 | 0 | 0.0021 | 0.001 | 0.0003 | 0 | 0 | 0.0003 |
Nucleus | 0.0456 | 0.0087 | 0.0156 | 0.0117 | 0.0197 | 0.0294 | 0.017 | 0.0068 | 0.014 | 0.0701 | 0.0312 | 0.0263 | 0.0572 | 0.0078 | 0.0122 | 0.0221 | 0.0231 | 0.0296 |
Peroxisomes | 0.0001 | 0 | 0 | 0 | 0 | 0.0003 | 0 | 0 | 0 | 0 | 0 | 0 | 0.0005 | 0 | 0 | 0 | 0 | 0 |
Punctate Nuclear | 0.0017 | 0.0003 | 0.0002 | 0.0015 | 0.0002 | 0.0014 | 0.0003 | 0.0001 | 0.0002 | 0.0002 | 0.0003 | 0.0003 | 0.0007 | 0.0001 | 0.0006 | 0.0001 | 0.0001 | 0.0015 |
Vacuole | 0.0014 | 0.0003 | 0.0002 | 0.0002 | 0.0011 | 0.0006 | 0.0003 | 0.0002 | 0.0002 | 0.0002 | 0.0028 | 0.0006 | 0.0029 | 0.0015 | 0.0005 | 0.0002 | 0.0002 | 0.0012 |
Vacuole Periphery | 0.0003 | 0 | 0 | 0.0001 | 0.0001 | 0.0001 | 0 | 0 | 0 | 0 | 0.0001 | 0.0001 | 0.0018 | 0.0001 | 0.0002 | 0.0001 | 0.0001 | 0.0004 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 165.285 | 169.4389 | 172.88 | 195.5256 | 180.655 | 162.3745 | 173.104 | 176.5408 | 153.7678 | 199.8603 |
Translational Efficiency | 1.1084 | 1.1004 | 1.0895 | 0.7538 | 1.098 | 1.1267 | 1.0632 | 0.9181 | 0.9997 | 0.9376 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
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37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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