Standard name | |
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Human Ortholog | |
Description | Cytoplasmic and mitochondrial histidine tRNA synthetase; efficient mitochondrial localization requires both a presequence and an amino-terminal sequence; mutations in human ortholog HARS2 are associated with Perrault syndrome |
ensLOC | DeepLoc | |||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 1 | 0 | 0 | 0 | 0 | 3 | 9 | 18 | 31 | 19 | 4 | 5 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 |
Bud | 2 | 2 | 0 | 0 | 0 | 0 | 1 | 2 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 2 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 7 | 8 | 4 | 5 | 9 | 14 | 11 | 27 | 31 | 23 | 6 | 8 | 1 | 2 | 7 | 11 | 11 | 9 | 1 | 0 | 1 | 0 | 0 | 0 |
Cytoplasm | 236 | 297 | 409 | 215 | 244 | 329 | 277 | 407 | 268 | 361 | 74 | 81 | 171 | 226 | 243 | 331 | 237 | 142 | 228 | 284 | 378 | 140 | 218 | 152 |
Endoplasmic Reticulum | 2 | 4 | 1 | 2 | 11 | 21 | 38 | 91 | 31 | 54 | 12 | 7 | 3 | 2 | 4 | 9 | 10 | 11 | 2 | 0 | 11 | 2 | 2 | 10 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
Golgi | 1 | 0 | 1 | 0 | 0 | 0 | 5 | 4 | 5 | 3 | 2 | 1 | 0 | 0 | 0 | 1 | 2 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
Mitochondria | 0 | 0 | 1 | 0 | 2 | 2 | 11 | 12 | 39 | 44 | 10 | 14 | 0 | 0 | 0 | 3 | 0 | 3 | 1 | 0 | 1 | 0 | 0 | 0 |
Nucleus | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vac/Vac Membrane | 0 | 1 | 0 | 1 | 0 | 0 | 1 | 3 | 1 | 3 | 0 | 0 | 1 | 0 | 1 | 1 | 4 | 0 | 0 | 1 | 2 | 0 | 0 | 3 |
Unique Cell Count | 239 | 302 | 413 | 219 | 259 | 357 | 329 | 520 | 346 | 463 | 98 | 103 | 174 | 227 | 250 | 338 | 244 | 146 | 238 | 289 | 410 | 146 | 226 | 174 |
Labelled Cell Count | 250 | 312 | 416 | 224 | 266 | 369 | 353 | 565 | 408 | 507 | 108 | 117 | 176 | 230 | 256 | 357 | 264 | 165 | 238 | 289 | 410 | 146 | 226 | 174 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 45.2 | 50.2 | 43.8 | 43.0 | 36.8 | 32.7 | 28.1 | 26.8 | 25.9 | 23.5 | 22.3 | 23.1 | 45.5 | 45.5 | 42.0 | 47.6 | 56.5 | 57.6 | 42.9 | 42.5 | 43.8 |
Std Deviation (1e-4) | 11.0 | 9.4 | 10.1 | 10.3 | 7.3 | 5.5 | 6.6 | 5.9 | 5.4 | 4.6 | 5.1 | 5.0 | 8.4 | 9.3 | 9.4 | 15.1 | 14.8 | 16.9 | 9.1 | 9.8 | 11.5 |
Intensity Change (Log2) | – | – | – | -0.03 | -0.25 | -0.42 | -0.64 | -0.71 | -0.76 | -0.9 | -0.97 | -0.92 | 0.05 | 0.05 | -0.06 | 0.12 | 0.37 | 0.39 | -0.03 | -0.04 | -0.0 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 3.8 | 6.2 | 4.2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 2.3 | 2.7 | 2.3 | 3.6 | 5.2 | 3.4 | 0 | 0 | 0 | 0 | 0 | 2.2 | 2.9 | 0 |
Cytoplasm | -0.9 | -3.7 | -4.8 | -7.6 | -9.5 | -9.5 | -9.5 | -9.2 | -8.5 | -0.8 | 0.7 | -1.8 | -1.3 | -1.8 | -1.5 |
Endoplasmic Reticulum | 0 | 0 | 4.7 | 6.9 | 8.8 | 6.0 | 7.0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 0 | 0 | 0 | 3.3 | 2.7 | 6.8 | 6.2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 38.1197 | 55.1441 | 48.9217 | 48.0838 | 40.8137 | 46.4275 | 42.6646 | 55.1773 | 50.3688 | 45.279 | 47.4635 | 48.0526 | 42.9618 | 58.3571 | 51.5024 | 47.4635 | 53.899 | 51.0337 |
Actin | 0.0385 | 0.0051 | 0.0033 | 0.0001 | 0.0038 | 0.0009 | 0.024 | 0.0002 | 0.0016 | 0.0002 | 0.0043 | 0.0006 | 0.012 | 0.0001 | 0.0117 | 0.0014 | 0.0002 | 0.0022 |
Bud | 0.001 | 0.0003 | 0.0011 | 0.0009 | 0.001 | 0.0008 | 0.0011 | 0.0002 | 0.0004 | 0.0011 | 0.0006 | 0.0003 | 0.0008 | 0.0002 | 0.0006 | 0.0016 | 0.0002 | 0.0009 |
Bud Neck | 0.0034 | 0.0008 | 0.0016 | 0.001 | 0.0018 | 0.0035 | 0.0005 | 0.0002 | 0.0003 | 0.0003 | 0.0008 | 0.0006 | 0.0005 | 0.0002 | 0.0004 | 0.0005 | 0.0005 | 0.0027 |
Bud Periphery | 0.0014 | 0.0001 | 0.0014 | 0.0009 | 0.0019 | 0.0009 | 0.0011 | 0.0002 | 0.0005 | 0.0008 | 0.0005 | 0.0002 | 0.0006 | 0.0002 | 0.0003 | 0.001 | 0 | 0.0017 |
Bud Site | 0.0025 | 0.0033 | 0.0053 | 0.0002 | 0.0009 | 0.0004 | 0.0025 | 0.0003 | 0.0003 | 0.0001 | 0.0007 | 0 | 0.0018 | 0.0001 | 0.0007 | 0.0028 | 0 | 0.0001 |
Cell Periphery | 0.0028 | 0.0013 | 0.008 | 0.003 | 0.0007 | 0.0011 | 0.001 | 0.0003 | 0.0003 | 0.0005 | 0.0001 | 0.0001 | 0.0007 | 0.0002 | 0.0001 | 0.0011 | 0.0001 | 0.0005 |
Cytoplasm | 0.7276 | 0.9598 | 0.8994 | 0.7522 | 0.8274 | 0.8731 | 0.8376 | 0.9806 | 0.9421 | 0.9395 | 0.9203 | 0.9471 | 0.8248 | 0.9836 | 0.9557 | 0.9048 | 0.9372 | 0.9626 |
Cytoplasmic Foci | 0.0077 | 0.0007 | 0.0015 | 0.0011 | 0.0025 | 0.0031 | 0.0038 | 0.001 | 0.0087 | 0.0046 | 0.0061 | 0.0033 | 0.0113 | 0.0005 | 0.0023 | 0.0122 | 0.0024 | 0.0025 |
Eisosomes | 0.0006 | 0.0001 | 0.0007 | 0 | 0.0001 | 0 | 0.0005 | 0 | 0 | 0 | 0 | 0 | 0.0001 | 0 | 0 | 0.0001 | 0 | 0 |
Endoplasmic Reticulum | 0.0448 | 0.0115 | 0.0076 | 0.0062 | 0.0223 | 0.02 | 0.018 | 0.0036 | 0.0118 | 0.0011 | 0.0085 | 0.0096 | 0.043 | 0.0042 | 0.0031 | 0.0032 | 0.0445 | 0.0095 |
Endosome | 0.017 | 0.0013 | 0.0044 | 0.0039 | 0.0222 | 0.0088 | 0.0163 | 0.0023 | 0.006 | 0.0091 | 0.0092 | 0.0094 | 0.03 | 0.002 | 0.0081 | 0.0173 | 0.0021 | 0.0043 |
Golgi | 0.0094 | 0.0002 | 0.0011 | 0.0001 | 0.0064 | 0.0015 | 0.0034 | 0.0003 | 0.0018 | 0.0002 | 0.0066 | 0.0015 | 0.0054 | 0.0001 | 0.0019 | 0.0018 | 0.0002 | 0.0008 |
Lipid Particles | 0.0078 | 0.0001 | 0.0006 | 0.0001 | 0.0014 | 0.0072 | 0.0017 | 0.0001 | 0.003 | 0.0001 | 0.0002 | 0.0001 | 0.0041 | 0 | 0.0003 | 0.0034 | 0 | 0.0001 |
Mitochondria | 0.0037 | 0.0001 | 0.0114 | 0.0001 | 0.0498 | 0.0217 | 0.014 | 0.0041 | 0.0011 | 0.0003 | 0.0325 | 0.0182 | 0.0059 | 0.0002 | 0.0007 | 0.0065 | 0.0002 | 0.0035 |
None | 0.0086 | 0.0001 | 0.0003 | 0.0001 | 0.0002 | 0.0003 | 0.0033 | 0.0003 | 0.0017 | 0.0003 | 0.0002 | 0.0006 | 0.0045 | 0.0001 | 0.0005 | 0.0032 | 0.0001 | 0.0003 |
Nuclear Periphery | 0.0294 | 0.0031 | 0.0076 | 0.0075 | 0.0037 | 0.0079 | 0.0137 | 0.0005 | 0.0015 | 0.0014 | 0.0013 | 0.0013 | 0.0199 | 0.0017 | 0.0026 | 0.0019 | 0.0064 | 0.0024 |
Nucleolus | 0.0013 | 0 | 0.0002 | 0.0001 | 0.0002 | 0.0004 | 0.0101 | 0.0003 | 0.0001 | 0.0001 | 0 | 0 | 0.0007 | 0 | 0 | 0.0007 | 0 | 0 |
Nucleus | 0.0099 | 0.0018 | 0.0039 | 0.0045 | 0.0023 | 0.0034 | 0.0081 | 0.0014 | 0.001 | 0.0019 | 0.0007 | 0.001 | 0.0084 | 0.0011 | 0.0026 | 0.0023 | 0.0013 | 0.0018 |
Peroxisomes | 0.0015 | 0 | 0.0004 | 0 | 0.0004 | 0.0011 | 0.0005 | 0 | 0.0026 | 0 | 0.0012 | 0 | 0.0003 | 0 | 0.0003 | 0.0005 | 0 | 0.0001 |
Punctate Nuclear | 0.0043 | 0.0001 | 0.0002 | 0 | 0.0001 | 0.0001 | 0.0053 | 0 | 0.0003 | 0 | 0 | 0 | 0.0025 | 0 | 0.0002 | 0.0003 | 0.0001 | 0.0001 |
Vacuole | 0.0635 | 0.0094 | 0.0362 | 0.1826 | 0.0409 | 0.0337 | 0.0277 | 0.003 | 0.0112 | 0.0318 | 0.0043 | 0.0045 | 0.0185 | 0.0046 | 0.0063 | 0.0268 | 0.0037 | 0.0029 |
Vacuole Periphery | 0.0134 | 0.0008 | 0.004 | 0.0353 | 0.0101 | 0.01 | 0.0056 | 0.0011 | 0.0035 | 0.0066 | 0.0018 | 0.0014 | 0.0041 | 0.0006 | 0.0015 | 0.0066 | 0.0007 | 0.0009 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 199.7021 | 193.5485 | 191.3465 | 199.3497 | 190.4867 | 155.2379 | 188.7075 | 186.0224 | 189.1726 | 196.6498 |
Translational Efficiency | 1.5239 | 1.6155 | 1.5023 | 1.5284 | 1.4159 | 1.7078 | 1.5388 | 1.2521 | 1.2929 | 1.2679 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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