Standard name | |
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Human Ortholog | |
Description | Heme-dependent repressor of hypoxic genes; mediates aerobic transcriptional repression of hypoxia induced genes such as COX5b and CYC7; repressor function regulated through decreased promoter occupancy in response to oxidative stress; contains an HMG domain that is responsible for DNA bending activity; involved in the hyperosmotic stress resistance |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
Bud | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 1 | 3 | 2 | 3 | 1 | 0 | 0 | 0 | 1 | 1 | 0 | 1 | 0 | 1 | 2 | 1 | 3 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 1 |
Bud Site | 1 | 0 | 1 | 0 | 0 | 1 | 4 | 1 | 7 | 6 | 13 | 10 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 8 | 2 | 6 | 14 | 24 | 19 | 22 | 12 | 13 | 8 | 10 | 14 | 16 | 25 | 46 | 38 | 22 | 23 | 0 | 0 | 0 | 1 | 2 | 1 |
Endoplasmic Reticulum | 1 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 9 | 6 | 7 | 0 | 0 | 0 | 0 | 1 | 1 |
Endosome | 1 | 0 | 1 | 0 | 6 | 0 | 0 | 0 | 1 | 0 | 0 | 3 | 0 | 1 | 2 | 5 | 10 | 2 | 2 | 1 | 1 | 1 | 0 | 2 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 3 | 1 | 2 | 2 | 2 | 0 | 0 | 0 |
Mitochondria | 31 | 5 | 0 | 2 | 8 | 29 | 100 | 40 | 80 | 84 | 103 | 60 | 2 | 1 | 0 | 13 | 6 | 18 | 7 | 0 | 2 | 2 | 3 | 7 |
Nucleus | 278 | 169 | 113 | 151 | 178 | 145 | 265 | 202 | 164 | 193 | 201 | 195 | 230 | 224 | 235 | 264 | 239 | 211 | 268 | 171 | 116 | 181 | 192 | 185 |
Nuclear Periphery | 0 | 1 | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 1 | 2 | 0 | 0 | 0 | 0 | 1 | 6 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 32 | 11 | 9 | 9 | 3 | 6 | 35 | 29 | 34 | 46 | 54 | 56 | 1 | 6 | 11 | 8 | 10 | 9 | 11 | 3 | 3 | 13 | 23 | 22 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 2 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 1 | 0 | 1 | 1 | 3 | 0 | 0 | 0 | 0 | 1 | 3 | 3 | 6 | 2 | 1 | 2 | 0 | 1 | 0 | 1 | 5 |
Vac/Vac Membrane | 1 | 2 | 2 | 0 | 5 | 5 | 1 | 3 | 0 | 3 | 0 | 4 | 6 | 2 | 2 | 20 | 20 | 11 | 3 | 4 | 3 | 8 | 27 | 37 |
Unique Cell Count | 299 | 177 | 125 | 167 | 211 | 177 | 317 | 243 | 216 | 249 | 259 | 255 | 251 | 258 | 291 | 332 | 296 | 258 | 306 | 186 | 135 | 216 | 257 | 275 |
Labelled Cell Count | 353 | 190 | 133 | 177 | 228 | 207 | 429 | 291 | 302 | 343 | 387 | 344 | 256 | 263 | 303 | 365 | 328 | 283 | 306 | 186 | 135 | 216 | 257 | 275 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 6.3 | 8.5 | 8.2 | 7.7 | 7.2 | 5.8 | 5.4 | 6.1 | 5.2 | 5.2 | 5.2 | 5.8 | 9.5 | 9.0 | 8.7 | 7.9 | 8.8 | 7.9 | 7.4 | 7.4 | 7.3 |
Std Deviation (1e-4) | 1.2 | 1.5 | 1.7 | 2.2 | 2.4 | 1.8 | 1.5 | 1.8 | 1.3 | 1.4 | 1.4 | 1.5 | 2.3 | 2.0 | 2.4 | 1.8 | 2.2 | 2.0 | 1.4 | 1.2 | 1.7 |
Intensity Change (Log2) | – | – | – | -0.09 | -0.19 | -0.5 | -0.62 | -0.42 | -0.65 | -0.67 | -0.65 | -0.5 | 0.2 | 0.13 | 0.09 | -0.06 | 0.09 | -0.05 | -0.16 | -0.15 | -0.17 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 1.2 | 2.0 | 1.8 | 0.8 | 0.1 | 0.5 | 0 | -0.4 | 0.3 | 0.6 | 1.6 | 3.1 | 2.1 | 1.0 | 1.4 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 0 | 0 | 4.8 | 7.1 | 4.8 | 7.8 | 7.4 | 8.2 | 5.9 | 0 | 0 | 0 | 0 | 0 | 3.0 |
Nucleus | 0 | -1.6 | -2.1 | -1.8 | -1.9 | -3.3 | -3.0 | -3.0 | -3.3 | 0.4 | -1.0 | -2.4 | -2.7 | -2.4 | -2.2 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | -0.6 | 0 | -1.5 | 1.2 | 1.4 | 2.3 | 2.9 | 3.4 | 3.6 | 0 | 0 | -1.5 | 0 | -1.7 | -1.6 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2.0 | 2.2 | 0 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 5.2569 | 4.9411 | 4.8639 | 4.7328 | 4.5491 | 4.8823 | 4.2301 | 3.7587 | 3.3901 | 3.2643 | 2.9558 | 3.8183 | 3.6925 | 2.7044 | 2.808 | 2.9738 | 3.1281 | 2.9242 |
Actin | 0.0054 | 0 | 0 | 0 | 0 | 0 | 0.0336 | 0 | 0.0088 | 0 | 0.0328 | 0.0008 | 0.0476 | 0 | 0.0024 | 0.0488 | 0.0437 | 0 |
Bud | 0.0002 | 0 | 0 | 0 | 0 | 0 | 0.0004 | 0.0001 | 0.0002 | 0 | 0.0003 | 0.0001 | 0.0012 | 0 | 0.001 | 0.0007 | 0.0008 | 0.0001 |
Bud Neck | 0.0007 | 0 | 0.0001 | 0 | 0.0003 | 0.0004 | 0.0012 | 0.0001 | 0.0003 | 0 | 0.0024 | 0.0013 | 0.0042 | 0 | 0.0003 | 0.001 | 0.0007 | 0.0005 |
Bud Periphery | 0.0005 | 0 | 0 | 0 | 0 | 0 | 0.0014 | 0.0003 | 0.0004 | 0 | 0.0006 | 0.0004 | 0.0033 | 0 | 0.0023 | 0.0006 | 0.0032 | 0 |
Bud Site | 0.0004 | 0 | 0 | 0 | 0 | 0 | 0.0015 | 0.0001 | 0.0003 | 0 | 0.0006 | 0.0002 | 0.0246 | 0 | 0.0031 | 0.0014 | 0.0006 | 0.0001 |
Cell Periphery | 0.0004 | 0 | 0 | 0 | 0 | 0 | 0.0007 | 0.0001 | 0.0001 | 0 | 0.0002 | 0.0001 | 0.0011 | 0 | 0.0004 | 0.0001 | 0.0004 | 0 |
Cytoplasm | 0.0004 | 0 | 0 | 0 | 0 | 0 | 0.0039 | 0.0001 | 0.0008 | 0 | 0.0032 | 0.0003 | 0.0202 | 0.0001 | 0.0013 | 0.0005 | 0.0007 | 0.0001 |
Cytoplasmic Foci | 0.0006 | 0 | 0.0022 | 0 | 0 | 0 | 0.0072 | 0.0001 | 0.0036 | 0 | 0.0031 | 0.0001 | 0.023 | 0 | 0.0142 | 0.0138 | 0.0026 | 0.0003 |
Eisosomes | 0.0001 | 0 | 0 | 0 | 0 | 0 | 0.0007 | 0 | 0.0001 | 0 | 0.0007 | 0 | 0.0005 | 0 | 0 | 0.0001 | 0.0008 | 0 |
Endoplasmic Reticulum | 0.0005 | 0 | 0 | 0 | 0 | 0 | 0.0073 | 0 | 0.0017 | 0 | 0.0084 | 0.0009 | 0.0047 | 0 | 0.0002 | 0.0002 | 0.0033 | 0 |
Endosome | 0.0014 | 0 | 0.0016 | 0 | 0 | 0 | 0.0096 | 0.0002 | 0.0069 | 0 | 0.0397 | 0.0019 | 0.0299 | 0 | 0.0029 | 0.0174 | 0.0052 | 0 |
Golgi | 0.0009 | 0 | 0.0005 | 0 | 0 | 0 | 0.0039 | 0 | 0.0017 | 0 | 0.008 | 0.0002 | 0.0091 | 0 | 0.0014 | 0.0675 | 0.0035 | 0 |
Lipid Particles | 0.0055 | 0 | 0.0047 | 0 | 0 | 0 | 0.0133 | 0.0007 | 0.0091 | 0 | 0.009 | 0.0002 | 0.0116 | 0 | 0.0009 | 0.004 | 0.0108 | 0 |
Mitochondria | 0.0039 | 0 | 0.0001 | 0 | 0.0002 | 0 | 0.009 | 0.0046 | 0.0009 | 0 | 0.0049 | 0.0009 | 0.0072 | 0.0001 | 0.0067 | 0.0061 | 0.0632 | 0.0002 |
None | 0.0003 | 0 | 0 | 0 | 0 | 0 | 0.008 | 0 | 0.0023 | 0 | 0.0115 | 0.0001 | 0.0024 | 0 | 0.0004 | 0.0001 | 0.0006 | 0.0001 |
Nuclear Periphery | 0.0054 | 0.0003 | 0.0022 | 0.0002 | 0.0014 | 0.0001 | 0.0168 | 0.0015 | 0.007 | 0.0001 | 0.0521 | 0.0058 | 0.012 | 0.0004 | 0.0024 | 0.0002 | 0.0221 | 0.0003 |
Nucleolus | 0.017 | 0.0104 | 0.011 | 0.0066 | 0.0888 | 0.0603 | 0.0247 | 0.0112 | 0.0125 | 0.0184 | 0.0672 | 0.0407 | 0.0093 | 0.0099 | 0.0122 | 0.0161 | 0.0578 | 0.0471 |
Nucleus | 0.9489 | 0.9864 | 0.9756 | 0.993 | 0.9051 | 0.9383 | 0.8375 | 0.9774 | 0.9328 | 0.9812 | 0.7313 | 0.9432 | 0.7711 | 0.9893 | 0.9295 | 0.8167 | 0.7336 | 0.9495 |
Peroxisomes | 0.001 | 0 | 0.0009 | 0 | 0 | 0 | 0.0071 | 0.0001 | 0.0058 | 0 | 0.002 | 0 | 0.0063 | 0 | 0.0016 | 0.0037 | 0.0384 | 0 |
Punctate Nuclear | 0.0042 | 0.0028 | 0.0007 | 0.0002 | 0.0039 | 0.0007 | 0.0044 | 0.0006 | 0.0036 | 0.0001 | 0.0174 | 0.0009 | 0.0026 | 0.0001 | 0.0083 | 0.0002 | 0.0045 | 0.0017 |
Vacuole | 0.0018 | 0 | 0.0001 | 0 | 0.0001 | 0 | 0.0048 | 0.0015 | 0.0006 | 0 | 0.0019 | 0.0013 | 0.0062 | 0 | 0.0059 | 0.0004 | 0.0014 | 0.0001 |
Vacuole Periphery | 0.0005 | 0 | 0.0001 | 0 | 0 | 0 | 0.003 | 0.0011 | 0.0006 | 0 | 0.0028 | 0.0006 | 0.002 | 0 | 0.0028 | 0.0003 | 0.0021 | 0 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 17.9415 | 10.6924 | 11.2402 | 31.3423 | 18.0927 | 10.9582 | 25.6764 | 39.2201 | 23.1705 | 27.397 |
Translational Efficiency | 1.4883 | 4.6675 | 3.968 | 0.9329 | 2.3505 | 3.4906 | 1.6901 | 1.0762 | 2.0945 | 1.7391 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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