Standard name | |
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Human Ortholog | |
Description | Mitochondrial protein; required for normal mitochondrial morphology and inheritance; component of the mitochondria-ER-cortex-ancor (MECA); interacts with Num1p to link the ER and mitochondria at the cell cortex; proposed involvement in the formation of Dnm1p and Num1p-containing cortical anchor complexes that promote mitochondrial fission |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 41 | 86 | 12 | 11 | 11 | 1 | 14 | – | 6 | 7 | 2 | 3 | 29 | 46 | 48 | 119 | 102 | 92 | 73 | 79 | 18 | 14 | 38 | 51 |
Bud | 21 | 16 | 0 | 7 | 2 | 3 | 7 | – | 3 | 9 | 5 | 3 | 7 | 3 | 2 | 17 | 8 | 7 | 4 | 3 | 0 | 0 | 2 | 3 |
Bud Neck | 1 | 0 | 1 | 0 | 1 | 1 | 2 | – | 0 | 1 | 0 | 0 | 0 | 2 | 2 | 0 | 2 | 0 | 21 | 30 | 3 | 9 | 12 | 15 |
Bud Site | 1 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 2 | 0 | – | – | – | – | – | – |
Cell Periphery | 35 | 78 | 15 | 2 | 7 | 4 | 4 | – | 0 | 4 | 1 | 0 | 61 | 111 | 111 | 86 | 75 | 110 | 93 | 101 | 29 | 38 | 84 | 91 |
Cytoplasm | 188 | 159 | 48 | 40 | 63 | 99 | 124 | – | 16 | 87 | 40 | 42 | 243 | 546 | 664 | 87 | 89 | 105 | 58 | 50 | 16 | 55 | 60 | 77 |
Endoplasmic Reticulum | 7 | 20 | 4 | 1 | 3 | 6 | 16 | – | 2 | 16 | 6 | 5 | 7 | 7 | 5 | 24 | 21 | 22 | 64 | 51 | 12 | 9 | 19 | 27 |
Endosome | 4 | 2 | 0 | 0 | 0 | 1 | 1 | – | 0 | 2 | 0 | 0 | 1 | 5 | 3 | 2 | 6 | 1 | 3 | 5 | 2 | 2 | 1 | 1 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 7 | 3 | 1 | 3 | 0 | 0 | 0 | 0 |
Mitochondria | 40 | 6 | 0 | 9 | 1 | 11 | 24 | – | 28 | 53 | 81 | 53 | 0 | 0 | 1 | 16 | 12 | 8 | 61 | 47 | 39 | 36 | 35 | 36 |
Nucleus | 4 | 2 | 0 | 4 | 0 | 1 | 1 | – | 0 | 2 | 0 | 1 | 0 | 2 | 4 | 3 | 1 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
Nuclear Periphery | 0 | 1 | 0 | 1 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 7 | 1 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 7 | 2 | 4 | 21 | 3 | 2 | 1 | 0 | 0 | 0 | 0 |
SpindlePole | 14 | 3 | 1 | 0 | 3 | 3 | 4 | – | 1 | 2 | 2 | 1 | 7 | 18 | 18 | 20 | 28 | 23 | 0 | 0 | 0 | 2 | 1 | 1 |
Vac/Vac Membrane | 1 | 2 | 0 | 0 | 1 | 2 | 0 | – | 0 | 1 | 0 | 0 | 2 | 0 | 2 | 3 | 11 | 6 | 12 | 14 | 2 | 7 | 9 | 12 |
Unique Cell Count | 299 | 289 | 76 | 55 | 82 | 119 | 174 | 43 | 150 | 114 | 84 | 295 | 632 | 731 | 286 | 289 | 302 | 403 | 393 | 130 | 182 | 272 | 325 | |
Labelled Cell Count | 364 | 376 | 81 | 75 | 92 | 132 | 197 | 56 | 184 | 137 | 108 | 358 | 748 | 862 | 385 | 385 | 381 | 403 | 393 | 130 | 182 | 272 | 325 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 4.8 | 6.0 | 6.0 | 5.2 | 6.2 | 5.0 | 4.9 | – | 4.0 | 4.6 | 4.1 | 4.4 | 6.4 | 6.3 | 6.2 | 7.5 | 7.8 | 7.2 | 6.0 | 6.1 | 6.2 |
Std Deviation (1e-4) | 0.8 | 0.7 | 0.7 | 1.0 | 1.3 | 1.6 | 0.9 | – | 0.8 | 1.0 | 1.2 | 0.8 | 1.2 | 1.2 | 1.1 | 1.1 | 1.4 | 1.1 | 1.3 | 1.3 | 1.1 |
Intensity Change (Log2) | – | – | – | -0.22 | 0.04 | -0.26 | -0.3 | – | -0.6 | -0.38 | -0.56 | -0.47 | 0.09 | 0.05 | 0.02 | 0.31 | 0.36 | 0.25 | -0.02 | 0.01 | 0.04 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0.6 | -0.4 | -4.1 | -1.8 | – | 0 | 0 | 0 | 0 | -1.5 | -2.6 | -2.9 | 4.2 | 3.3 | 2.6 |
Bud | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | -2.7 | -2.0 | -3.8 | -4.8 | – | 0 | 0 | 0 | 0 | 0.2 | -0.5 | -1.0 | 1.8 | 1.1 | 2.8 |
Cytoplasm | 1.2 | 1.9 | 3.2 | 1.3 | – | -2.7 | -0.7 | -3.8 | -1.7 | 3.6 | 5.2 | 7.1 | -5.2 | -5.2 | -4.5 |
Endoplasmic Reticulum | 0 | 0 | 0 | 1.1 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.9 | 0.6 | 0.6 |
Endosome | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 0 | 0 | 0 | 3.4 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleus | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2.4 | 0 |
Vacuole | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 0.7353 | 0.9176 | 0.8628 | 0.4102 | 0.6817 | 0.7612 | 1.227 | 1.1859 | 1.3621 | 0.9971 | 1.0141 | 1.0666 | 1.7622 | 1.9038 | 1.8354 | 1.9232 | 1.857 | 1.8056 |
Actin | 0.0989 | 0.0587 | 0.0988 | 0.1124 | 0.1401 | 0.0562 | 0.0829 | 0.0983 | 0.0528 | 0.0792 | 0.0773 | 0.0612 | 0.103 | 0.0453 | 0.0774 | 0.1001 | 0.012 | 0.0669 |
Bud | 0.006 | 0.0034 | 0.0056 | 0.0038 | 0.0086 | 0.0042 | 0.0031 | 0.0033 | 0.0038 | 0.0028 | 0.0126 | 0.0044 | 0.004 | 0.0052 | 0.0066 | 0.0032 | 0.0155 | 0.0059 |
Bud Neck | 0.0334 | 0.0069 | 0.0257 | 0.0213 | 0.0575 | 0.0338 | 0.023 | 0.0098 | 0.0192 | 0.0244 | 0.0306 | 0.0227 | 0.0242 | 0.0051 | 0.0342 | 0.0222 | 0.0054 | 0.03 |
Bud Periphery | 0.0289 | 0.0077 | 0.0168 | 0.0261 | 0.0347 | 0.0315 | 0.0119 | 0.0126 | 0.021 | 0.023 | 0.0341 | 0.037 | 0.0165 | 0.0062 | 0.0167 | 0.011 | 0.0472 | 0.0313 |
Bud Site | 0.063 | 0.144 | 0.0518 | 0.0227 | 0.0189 | 0.0134 | 0.0282 | 0.1838 | 0.0621 | 0.0219 | 0.0375 | 0.0082 | 0.0354 | 0.168 | 0.0744 | 0.0713 | 0.0212 | 0.0147 |
Cell Periphery | 0.0866 | 0.035 | 0.056 | 0.0196 | 0.0406 | 0.0563 | 0.0843 | 0.0656 | 0.074 | 0.103 | 0.0557 | 0.0808 | 0.0588 | 0.05 | 0.0513 | 0.0477 | 0.0153 | 0.0732 |
Cytoplasm | 0.2882 | 0.4155 | 0.3364 | 0.3113 | 0.258 | 0.4446 | 0.3814 | 0.3744 | 0.4863 | 0.4491 | 0.3436 | 0.4851 | 0.4198 | 0.5092 | 0.4857 | 0.4572 | 0.4344 | 0.533 |
Cytoplasmic Foci | 0.0359 | 0.0378 | 0.0354 | 0.106 | 0.0602 | 0.0461 | 0.0305 | 0.0222 | 0.022 | 0.014 | 0.0517 | 0.0312 | 0.048 | 0.0318 | 0.0417 | 0.044 | 0.1187 | 0.0344 |
Eisosomes | 0.0186 | 0.01 | 0.0102 | 0.0048 | 0.0059 | 0.0036 | 0.0164 | 0.0136 | 0.009 | 0.0193 | 0.0065 | 0.0121 | 0.0165 | 0.0058 | 0.0109 | 0.0049 | 0.0012 | 0.0099 |
Endoplasmic Reticulum | 0.0105 | 0.0102 | 0.0099 | 0.0056 | 0.0098 | 0.0062 | 0.0135 | 0.0045 | 0.006 | 0.0227 | 0.0049 | 0.0081 | 0.0067 | 0.0073 | 0.0089 | 0.0126 | 0.0036 | 0.005 |
Endosome | 0.0228 | 0.0304 | 0.0204 | 0.0355 | 0.0257 | 0.016 | 0.0189 | 0.005 | 0.007 | 0.0062 | 0.0391 | 0.008 | 0.0167 | 0.0102 | 0.0094 | 0.018 | 0.032 | 0.0068 |
Golgi | 0.0141 | 0.0225 | 0.0146 | 0.0311 | 0.0274 | 0.01 | 0.0104 | 0.0115 | 0.0075 | 0.0116 | 0.0175 | 0.0074 | 0.0138 | 0.0134 | 0.009 | 0.008 | 0.0059 | 0.0085 |
Lipid Particles | 0.0123 | 0.0031 | 0.0055 | 0.0077 | 0.0199 | 0.0053 | 0.0068 | 0.0017 | 0.0029 | 0.0192 | 0.0283 | 0.0031 | 0.0081 | 0.0017 | 0.0052 | 0.0031 | 0.0331 | 0.0102 |
Mitochondria | 0.0104 | 0.0069 | 0.014 | 0.0047 | 0.0407 | 0.0108 | 0.0074 | 0.0098 | 0.0103 | 0.0185 | 0.0153 | 0.0086 | 0.0101 | 0.0075 | 0.0177 | 0.0018 | 0.0081 | 0.0114 |
None | 0.2139 | 0.197 | 0.2691 | 0.2654 | 0.1794 | 0.2456 | 0.2511 | 0.174 | 0.197 | 0.1635 | 0.1821 | 0.2056 | 0.1774 | 0.1242 | 0.1164 | 0.1378 | 0.1573 | 0.1363 |
Nuclear Periphery | 0.0037 | 0.0007 | 0.0021 | 0.0006 | 0.0146 | 0.0004 | 0.0036 | 0.0003 | 0.0012 | 0.0005 | 0.0037 | 0.0023 | 0.0095 | 0.0003 | 0.0008 | 0.0014 | 0.0023 | 0.0006 |
Nucleolus | 0.0098 | 0.0009 | 0.0017 | 0.0006 | 0.0057 | 0.0007 | 0.0031 | 0.0006 | 0.001 | 0.002 | 0.0041 | 0.0007 | 0.0038 | 0.0004 | 0.0047 | 0.0024 | 0.0085 | 0.001 |
Nucleus | 0.0061 | 0.0016 | 0.0025 | 0.0011 | 0.0081 | 0.0011 | 0.0052 | 0.001 | 0.0016 | 0.0015 | 0.006 | 0.0027 | 0.009 | 0.0008 | 0.0029 | 0.0364 | 0.0047 | 0.002 |
Peroxisomes | 0.0166 | 0.0019 | 0.0139 | 0.0148 | 0.0178 | 0.0065 | 0.0049 | 0.0047 | 0.0027 | 0.0127 | 0.0174 | 0.0036 | 0.0068 | 0.0043 | 0.0097 | 0.006 | 0.0094 | 0.0147 |
Punctate Nuclear | 0.0095 | 0.0011 | 0.0035 | 0.0013 | 0.0182 | 0.0012 | 0.0071 | 0.0005 | 0.0034 | 0.0005 | 0.0219 | 0.0033 | 0.002 | 0.0004 | 0.0037 | 0.0057 | 0.0318 | 0.0019 |
Vacuole | 0.0097 | 0.0041 | 0.005 | 0.0028 | 0.0055 | 0.0056 | 0.0055 | 0.0026 | 0.0085 | 0.004 | 0.009 | 0.0033 | 0.008 | 0.0026 | 0.0116 | 0.0049 | 0.0282 | 0.0019 |
Vacuole Periphery | 0.0012 | 0.0005 | 0.0012 | 0.0005 | 0.0026 | 0.0006 | 0.0008 | 0.0002 | 0.0005 | 0.0005 | 0.0012 | 0.0004 | 0.0018 | 0.0002 | 0.0011 | 0.0003 | 0.0041 | 0.0004 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 9.8292 | 5.6688 | 4.6272 | 6.153 | 5.7553 | 5.7041 | 7.0214 | 7.5437 | 5.3513 | 7.1811 |
Translational Efficiency | 0.3476 | 0.6576 | 0.6573 | 0.5574 | 0.4729 | 0.945 | 0.6509 | 0.5873 | 0.6688 | 0.6652 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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