Standard name
Human Ortholog
Description Alternate beta-subunit of the Snf1p kinase complex; may confer substrate specificity; vacuolar protein containing KIS (Kinase-Interacting Sequence) and ASC (Association with Snf1 kinase Complex) domains involved in protein interactions
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Micrographs

ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud 0 0 0 0 0 0 0 0 0 0 0.06 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Neck 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Site 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 – – – – – –
Cell Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.07 0.07 0 0 0 0 0 0
Cytoplasm 0.98 0.96 1.0 0.98 0.99 0.97 0.95 0.96 0.9 0.86 0.77 0.91 0.96 1.0 0.99 0.95 0.95 0.96 0.9 0.9 0.89 0.76 0.83 0.81
Endoplasmic Reticulum 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.05 0 0 0 0 0.05 0 0
Endosome 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Golgi 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Mitochondria 0 0.08 0 0 0 0.06 0.11 0.05 0.24 0.27 0.37 0.15 0 0 0 0 0 0 0 0 0 0 0 0
Nucleus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nuclear Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nucleolus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Peroxisomes 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
SpindlePole 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Vac/Vac Membrane 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.05 0.06 0 0 0 0 0.09 0.05 0.06
ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 1 2 1
Bud 1 0 0 1 1 0 2 1 3 12 16 4 4 0 4 0 0 0 0 1 4 2 2 3
Bud Neck 0 0 0 0 0 1 1 2 0 0 2 1 0 0 0 0 0 0 0 0 0 1 1 5
Bud Site 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 – – – – – –
Cell Periphery 4 2 4 4 3 2 6 3 5 7 1 1 2 3 7 7 17 14 0 0 0 1 0 0
Cytoplasm 169 135 241 251 317 259 378 307 301 300 196 297 230 321 412 265 237 206 159 138 204 140 242 210
Endoplasmic Reticulum 1 0 1 1 0 0 0 0 0 1 1 0 2 1 1 12 12 8 2 0 2 9 11 9
Endosome 0 0 0 1 0 0 1 0 2 2 2 3 2 0 0 1 0 1 1 3 0 2 0 1
Golgi 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 1 0 0 0 0 0 0
Mitochondria 3 11 0 0 2 16 43 16 79 96 94 49 2 2 1 6 1 3 2 1 5 6 9 7
Nucleus 1 0 1 1 0 3 3 8 4 2 2 1 0 0 1 4 3 1 0 0 0 0 0 0
Nuclear Periphery 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 1 0 0 1 0 0
Nucleolus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 1
Peroxisomes 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
SpindlePole 0 1 0 0 0 0 0 1 2 0 1 1 0 0 0 0 0 0 0 1 0 0 0 0
Vac/Vac Membrane 0 0 0 1 3 2 2 1 3 1 3 1 2 1 0 13 15 5 2 2 4 16 15 15
Unique Cell Count 173 141 242 255 320 267 398 320 334 350 254 328 240 322 416 278 250 215 177 153 229 184 291 261
Labelled Cell Count 179 149 247 260 327 283 436 339 399 422 318 358 245 328 428 308 287 239 177 153 229 184 291 261


Cytoplasm

(Huh et al. Nature 2003 425:686)
Screen WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 AF100 AF140 AF180
Mean Cell GFP Intensity (1e-4) 5.8 4.4 6.1 5.6 5.9 4.9 5.0 5.5 4.4 4.4 4.3 4.8 5.9 6.0 6.1 8.8 8.8 8.6 5.5 5.5 6.0
Std Deviation (1e-4) 1.0 0.8 1.5 1.0 1.2 1.5 1.5 1.6 1.2 1.2 1.5 1.2 1.2 0.9 1.4 1.7 1.6 1.4 1.1 1.0 1.8
Intensity Change (Log2) – – – -0.12 -0.05 -0.3 -0.28 -0.16 -0.48 -0.48 -0.5 -0.34 -0.05 -0.02 -0.0 0.53 0.53 0.49 -0.14 -0.16 -0.03


Localization RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3
Actin – – – – – – – – – – – – – – –
Bud – – – – – – – – – – – – 0 0 –
Bud Neck – – – – – – – – – – – – 0 0 –
Bud Site – – – – – – – – – – – – 0 0 –
Cell Periphery – – – – – – – – – – – – 0 0 –
Cyto – – – – – – – – – – – – – – –
Endoplasmic Reticulum – – – – – – – – – – – – 0 0 –
Endosome – – – – – – – – – – – – 0 0 –
Golgi – – – – – – – – – – – – 0 0 –
Mitochondria – – – – – – – – – – – – 0 0 –
Nuclear Periphery – – – – – – – – – – – – 0 0 –
Nuc – – – – – – – – – – – – – – –
Nucleolus – – – – – – – – – – – – 0 0 –
Peroxisomes – – – – – – – – – – – – 0 0 –
SpindlePole – – – – – – – – – – – – 0 0 –
Vac – – – – – – – – – – – – – – –
Cortical Patches – – – – – – – – – – – – 0 0 –
Cytoplasm – – – – – – – – – – – – 0 0 –
Nucleus – – – – – – – – – – – – 0 0 –
Vacuole – – – – – – – – – – – – 3.4 3.9 –