Standard name
Human Ortholog
Description Zeta subunit of the coatomer complex (COPI); COPI coats Golgi-derived transport vesicles; involved in retrograde transport between Golgi and ER
DOWNLOAD

Micrographs

ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches – 0 – – – – – – – – – – – – – 0.19 0.11 0.18 – 0 0 0 0 0.65
Bud – 0 – – – – – – – – – – – – – 0 0 0 – 0 0 0 0 0
Bud Neck – 0 – – – – – – – – – – – – – 0 0 0 – 0 0.72 0 0 0
Bud Site – 0 – – – – – – – – – – – – – 0 0 0 – – – – – –
Cell Periphery – 0 – – – – – – – – – – – – – 0 0 0 – 0 0 0 0 0
Cytoplasm – 0.74 – – – – – – – – – – – – – 0.09 0.14 0.08 – 0.57 0 0 0 0
Endoplasmic Reticulum – 0.09 – – – – – – – – – – – – – 0 0 0.07 – 0.05 0 0 0 0
Endosome – 0 – – – – – – – – – – – – – 0 0 0 – 0 0 0.17 0 0
Golgi – 0.12 – – – – – – – – – – – – – 0.81 0.73 0.73 – 0.08 0 0 0 0.33
Mitochondria – 0 – – – – – – – – – – – – – 0.18 0.11 0.2 – 0 0 0.19 0 0
Nucleus – 0 – – – – – – – – – – – – – 0 0 0 – 0 0 0 0 0
Nuclear Periphery – 0 – – – – – – – – – – – – – 0 0 0 – 0 0 0 0 0
Nucleolus – 0 – – – – – – – – – – – – – 0 0 0 – 0 0.28 0 0.33 0
Peroxisomes – 0 – – – – – – – – – – – – – 0 0 0 – 0 0 0.33 0.49 0
SpindlePole – 0 – – – – – – – – – – – – – 0 0 0 – 0 0 0 0 0
Vac/Vac Membrane – 0.08 – – – – – – – – – – – – – 0.05 0.05 0.13 – 0.16 0 0 0 0
ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches – 5 – – – – – – – – – – – – – 15 4 11 – 7 0 0 0 0
Bud – 1 – – – – – – – – – – – – – 2 1 0 – 5 0 0 0 0
Bud Neck – 0 – – – – – – – – – – – – – 0 0 0 – 1 0 0 0 0
Bud Site – 0 – – – – – – – – – – – – – 0 0 0 – – – – – –
Cell Periphery – 2 – – – – – – – – – – – – – 0 1 0 – 0 0 0 0 0
Cytoplasm – 120 – – – – – – – – – – – – – 7 5 5 – 123 0 0 0 0
Endoplasmic Reticulum – 14 – – – – – – – – – – – – – 3 1 4 – 10 0 0 0 0
Endosome – 0 – – – – – – – – – – – – – 0 0 0 – 6 0 0 0 0
Golgi – 20 – – – – – – – – – – – – – 62 27 44 – 17 0 0 0 0
Mitochondria – 0 – – – – – – – – – – – – – 14 4 12 – 5 0 0 0 0
Nucleus – 0 – – – – – – – – – – – – – 0 0 0 – 1 0 0 0 0
Nuclear Periphery – 0 – – – – – – – – – – – – – 0 1 1 – 0 0 0 0 0
Nucleolus – 0 – – – – – – – – – – – – – 1 0 1 – 0 0 0 0 0
Peroxisomes – 0 – – – – – – – – – – – – – 0 0 0 – 0 0 0 0 0
SpindlePole – 0 – – – – – – – – – – – – – 0 0 0 – 1 0 0 0 0
Vac/Vac Membrane – 13 – – – – – – – – – – – – – 4 2 8 – 34 0 0 0 0
Unique Cell Count 163 77 37 60 218 1 1 2 1
Labelled Cell Count 175 108 46 86 218 1 1 2 1


Punctate Nuclear

(Huh et al. Nature 2003 425:686)
Screen WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 AF100 AF140 AF180
Mean Cell GFP Intensity (1e-4) – 15.4 – – – – – – – – – – – – – 28.8 29.3 29.8 – – –
Std Deviation (1e-4) – 2.1 – – – – – – – – – – – – – 8.8 10.0 10.3 – – –
Intensity Change (Log2) – – – – – – – – – – – – – – – – – – – – –


Localization RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3
Actin – – – – – – – – – – – – – – –
Bud – – – – – – – – – – – – – – –
Bud Neck – – – – – – – – – – – – – – –
Bud Site – – – – – – – – – – – – – – –
Cell Periphery – – – – – – – – – – – – – – –
Cyto – – – – – – – – – – – – – – –
Endoplasmic Reticulum – – – – – – – – – – – – – – –
Endosome – – – – – – – – – – – – – – –
Golgi – – – – – – – – – – – – – – –
Mitochondria – – – – – – – – – – – – – – –
Nuclear Periphery – – – – – – – – – – – – – – –
Nuc – – – – – – – – – – – – – – –
Nucleolus – – – – – – – – – – – – – – –
Peroxisomes – – – – – – – – – – – – – – –
SpindlePole – – – – – – – – – – – – – – –
Vac – – – – – – – – – – – – – – –
Cortical Patches – – – – – – – – – – – – – – –
Cytoplasm – – – – – – – – – – – – – – –
Nucleus – – – – – – – – – – – – – – –
Vacuole – – – – – – – – – – – – – – –