Standard name | |
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Human Ortholog | |
Description | Oxalyl-CoA synthetase; capable of catalyzing conversion of oxalate to oxalyl-CoA; catalyzes first step in pathway of oxalate degradation that functions to protect yeast from inhibitory effects of oxalate; peroxisomal protein that binds mRNA; localizes to both peroxisomal peripheral membrane and matrix, expression is highly inducible by oleic acid; similar to E. coli long chain acyl-CoA synthetase |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | – | 0 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 2 | 4 |
Bud | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 4 | – | 3 | 5 | 4 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 2 | 0 | 1 | 13 | 22 |
Bud Neck | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 1 | 0 | 4 | 1 | 1 | 3 | 10 | 12 | – | 10 | 7 | 11 | 0 | 2 | 0 | 0 | 1 | 3 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 217 | 180 | 262 | 178 | 250 | 266 | 300 | 424 | – | 259 | 193 | 303 | 41 | 160 | 180 | 109 | 227 | 143 | 208 | 168 | 250 | 286 | 365 | 395 |
Endoplasmic Reticulum | 2 | 1 | 1 | 1 | 0 | 3 | 4 | 4 | – | 12 | 4 | 6 | 0 | 2 | 1 | 5 | 8 | 6 | 2 | 0 | 3 | 2 | 2 | 3 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 2 | 6 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 3 |
Mitochondria | 0 | 0 | 2 | 6 | 9 | 31 | 55 | 76 | – | 83 | 89 | 106 | 0 | 0 | 0 | 3 | 4 | 1 | 3 | 0 | 1 | 3 | 4 | 9 |
Nucleus | 0 | 0 | 1 | 1 | 0 | 2 | 2 | 11 | – | 6 | 7 | 8 | 1 | 1 | 0 | 11 | 2 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
Nuclear Periphery | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 2 | – | 0 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 2 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 4 |
Vac/Vac Membrane | 0 | 0 | 2 | 3 | 9 | 24 | 38 | 53 | – | 51 | 43 | 78 | 1 | 0 | 1 | 2 | 13 | 4 | 1 | 1 | 0 | 1 | 3 | 7 |
Unique Cell Count | 219 | 181 | 266 | 185 | 264 | 308 | 378 | 543 | 376 | 301 | 464 | 43 | 161 | 180 | 113 | 242 | 147 | 219 | 175 | 265 | 300 | 403 | 466 | |
Labelled Cell Count | 221 | 181 | 273 | 191 | 271 | 329 | 411 | 589 | 424 | 351 | 520 | 44 | 165 | 182 | 130 | 258 | 158 | 219 | 175 | 265 | 300 | 403 | 466 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 7.1 | 7.6 | 6.3 | 6.3 | 7.8 | 7.3 | 7.6 | 7.7 | – | 7.8 | 7.7 | 8.0 | 8.8 | 9.0 | 10.5 | 14.0 | 17.6 | 22.3 | 8.8 | 9.3 | 9.5 |
Std Deviation (1e-4) | 1.5 | 2.0 | 1.5 | 1.5 | 2.2 | 1.9 | 2.1 | 2.1 | – | 2.1 | 2.2 | 2.1 | 2.0 | 2.0 | 2.8 | 5.0 | 6.7 | 7.0 | 4.1 | 7.6 | 7.6 |
Intensity Change (Log2) | – | – | – | -0.01 | 0.31 | 0.21 | 0.26 | 0.29 | – | 0.31 | 0.3 | 0.34 | 0.48 | 0.51 | 0.74 | 1.16 | 1.49 | 1.82 | 0.49 | 0.57 | 0.59 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | 1.0 | 0.7 | – | 1.0 | 0.7 | 0.8 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | -1.5 | -2.4 | -5.3 | -7.2 | -7.6 | – | -9.5 | -10.3 | -10.3 | -1.4 | 0.8 | 1.7 | -1.3 | -2.8 | -0.9 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | – | 2.5 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 0 | 2.1 | 4.8 | 6.1 | 6.0 | – | 7.9 | 9.3 | 8.1 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleus | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | 0 | 2.1 | 4.0 | 4.8 | 4.8 | – | 5.8 | 5.9 | 6.7 | 0 | 0 | 0 | 0 | 3.1 | 0 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 5.7451 | 6.901 | 6.4351 | 5.7561 | 5.6005 | 6.5794 | 4.4552 | 7.2853 | 7.4708 | 6.7311 | 6.02 | 6.9776 | 3.537 | 6.1681 | 5.0147 | 5.1102 | 5.0092 | 4.8891 |
Actin | 0.0285 | 0.0036 | 0.0235 | 0.0079 | 0.008 | 0.0073 | 0.019 | 0.0022 | 0.0004 | 0.0003 | 0.0041 | 0.0018 | 0.0309 | 0.0002 | 0.0126 | 0.0002 | 0.0001 | 0.0002 |
Bud | 0.0067 | 0.0166 | 0.0187 | 0.0029 | 0.0003 | 0.0018 | 0.0023 | 0.0069 | 0.0001 | 0.0004 | 0.0001 | 0.0002 | 0.001 | 0.0001 | 0.0002 | 0.0001 | 0.0001 | 0 |
Bud Neck | 0.012 | 0.0004 | 0.0012 | 0.0014 | 0.0011 | 0.0037 | 0.0005 | 0.0003 | 0.0002 | 0.0005 | 0.0003 | 0.0059 | 0.0004 | 0.0001 | 0.0004 | 0.0002 | 0.0002 | 0.0005 |
Bud Periphery | 0.0038 | 0.0032 | 0.0074 | 0.0025 | 0.0004 | 0.0008 | 0.0016 | 0.0022 | 0 | 0.0002 | 0 | 0 | 0.0017 | 0 | 0.0001 | 0 | 0 | 0 |
Bud Site | 0.0055 | 0.0095 | 0.0047 | 0.0015 | 0.0009 | 0.0009 | 0.0021 | 0.0076 | 0.0003 | 0.0022 | 0.0002 | 0.0001 | 0.0026 | 0.0001 | 0.0056 | 0 | 0 | 0 |
Cell Periphery | 0.0003 | 0.0002 | 0.0002 | 0.0002 | 0.0001 | 0.0001 | 0.0002 | 0.0002 | 0 | 0 | 0 | 0 | 0.0003 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 0.6758 | 0.9012 | 0.7909 | 0.7953 | 0.7254 | 0.8957 | 0.8073 | 0.9045 | 0.9433 | 0.8462 | 0.9243 | 0.866 | 0.7853 | 0.9822 | 0.9479 | 0.9867 | 0.995 | 0.9692 |
Cytoplasmic Foci | 0.0481 | 0.0122 | 0.0408 | 0.0301 | 0.0294 | 0.0087 | 0.045 | 0.0388 | 0.0336 | 0.09 | 0.0122 | 0.0838 | 0.0122 | 0.0005 | 0.002 | 0.0011 | 0.0006 | 0.0168 |
Eisosomes | 0.0003 | 0 | 0.0001 | 0 | 0.0001 | 0 | 0.0002 | 0 | 0 | 0 | 0 | 0.0003 | 0.0011 | 0 | 0.0001 | 0 | 0 | 0 |
Endoplasmic Reticulum | 0.0124 | 0.0023 | 0.0029 | 0.009 | 0.0033 | 0.0046 | 0.008 | 0.0011 | 0.0007 | 0.0006 | 0.0009 | 0.0006 | 0.0219 | 0.0004 | 0.0009 | 0.0005 | 0.0001 | 0.0008 |
Endosome | 0.0434 | 0.0047 | 0.0128 | 0.0376 | 0.0658 | 0.0224 | 0.0111 | 0.0004 | 0.0009 | 0.03 | 0.0012 | 0.0006 | 0.0118 | 0.0001 | 0.0006 | 0.0004 | 0.0001 | 0.0007 |
Golgi | 0.009 | 0.0005 | 0.0049 | 0.0076 | 0.0298 | 0.0048 | 0.0038 | 0.0002 | 0.0001 | 0.0047 | 0.0029 | 0.0002 | 0.004 | 0 | 0.0003 | 0 | 0 | 0 |
Lipid Particles | 0.0134 | 0.0001 | 0.0054 | 0.0018 | 0.0377 | 0.0034 | 0.0046 | 0.0002 | 0 | 0.0045 | 0.0034 | 0.0005 | 0.0024 | 0 | 0.0001 | 0 | 0 | 0 |
Mitochondria | 0.0145 | 0.0011 | 0.0035 | 0.0034 | 0.0252 | 0.0017 | 0.0169 | 0.0001 | 0.0001 | 0.0019 | 0.0007 | 0.0002 | 0.0172 | 0 | 0.0181 | 0 | 0 | 0 |
None | 0.0485 | 0.0262 | 0.0285 | 0.0534 | 0.0051 | 0.0137 | 0.038 | 0.0286 | 0.009 | 0.0029 | 0.0051 | 0.024 | 0.0578 | 0.0153 | 0.0079 | 0.0091 | 0.0014 | 0.0071 |
Nuclear Periphery | 0.0257 | 0.0019 | 0.0068 | 0.0049 | 0.0077 | 0.01 | 0.0064 | 0.0004 | 0.0004 | 0.0005 | 0.0005 | 0.0008 | 0.0072 | 0.0001 | 0.0005 | 0.0003 | 0.0001 | 0.0008 |
Nucleolus | 0.0021 | 0.0003 | 0.0006 | 0.0002 | 0.0009 | 0.0002 | 0.0004 | 0.0001 | 0 | 0.0005 | 0 | 0.0005 | 0.0003 | 0 | 0 | 0 | 0 | 0 |
Nucleus | 0.0202 | 0.0115 | 0.0199 | 0.0089 | 0.0054 | 0.0138 | 0.0029 | 0.0018 | 0.0017 | 0.0031 | 0.0031 | 0.0024 | 0.0022 | 0.0008 | 0.0018 | 0.0011 | 0.0024 | 0.0031 |
Peroxisomes | 0.0086 | 0.0005 | 0.0162 | 0.0197 | 0.0115 | 0.0008 | 0.021 | 0.0022 | 0.0007 | 0.0048 | 0.0404 | 0.001 | 0.0047 | 0 | 0.0004 | 0 | 0 | 0 |
Punctate Nuclear | 0.0172 | 0.0023 | 0.0084 | 0.003 | 0.0383 | 0.0027 | 0.0072 | 0.0015 | 0.008 | 0.0031 | 0.0004 | 0.0107 | 0.0334 | 0 | 0.0002 | 0.0001 | 0 | 0.0005 |
Vacuole | 0.0027 | 0.0014 | 0.0019 | 0.0068 | 0.0022 | 0.0018 | 0.0011 | 0.0007 | 0.0002 | 0.0029 | 0.0002 | 0.0002 | 0.001 | 0.0001 | 0.0002 | 0.0002 | 0 | 0.0002 |
Vacuole Periphery | 0.0015 | 0.0002 | 0.0005 | 0.0021 | 0.0016 | 0.0009 | 0.0005 | 0.0001 | 0 | 0.0004 | 0 | 0.0001 | 0.0007 | 0 | 0.0001 | 0 | 0 | 0.0001 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 45.9752 | 53.187 | 56.5096 | 55.1842 | 50.4045 | 55.41 | 68.291 | 72.5921 | 65.7736 | 60.9989 |
Translational Efficiency | 1.3804 | 1.5761 | 1.4099 | 1.4748 | 1.4764 | 1.4961 | 1.4561 | 1.5247 | 1.4748 | 1.2657 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✔ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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