Standard name | |
---|---|
Human Ortholog | |
Description | Subunit (61/68 kDa) of TFIID and SAGA complexes; involved in RNA polymerase II transcription initiation and in chromatin modification, similar to histone H2A; overexpression of the human ortholog, TAF12, an oncogene involved in the formation of choroid plexus carcinomas, results in dosage chromosomal instability (dCIN) in a human cell line similar to the dCIN observed in yeast overexpressors |
ensLOC | DeepLoc | |||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 1 | 2 | 0 | 6 | 2 | 2 | 3 | 4 | 4 | 0 | 1 | 0 | 0 | 0 | 0 | 2 | 3 | 2 | 0 | 0 | 1 |
Bud Neck | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 5 | 0 | 4 | 1 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 1 | 3 | 1 | 3 | 6 | 3 | 18 | 10 | 10 | 20 | 7 | 6 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 3 | 5 | 6 | 5 | 4 | 7 | 7 | 13 | 9 | 0 | 2 | 4 | 0 | 10 | 8 | 41 | 15 | 12 | 1 | 0 | 0 | 1 | 0 | 0 |
Endoplasmic Reticulum | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 8 | 3 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 6 | 3 | 4 | 0 | 2 | 1 | 0 | 3 | 1 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 3 | 2 |
Mitochondria | 4 | 17 | 29 | 12 | 35 | 58 | 152 | 96 | 57 | 105 | 44 | 67 | 2 | 1 | 1 | 10 | 3 | 6 | 0 | 2 | 1 | 1 | 3 | 1 |
Nucleus | 56 | 231 | 216 | 170 | 210 | 234 | 316 | 305 | 166 | 216 | 131 | 123 | 61 | 120 | 85 | 120 | 61 | 51 | 47 | 239 | 198 | 48 | 49 | 56 |
Nuclear Periphery | 0 | 1 | 0 | 5 | 3 | 4 | 13 | 7 | 5 | 6 | 1 | 5 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
Nucleolus | 38 | 90 | 111 | 103 | 113 | 197 | 287 | 257 | 184 | 217 | 140 | 138 | 43 | 70 | 53 | 45 | 23 | 25 | 20 | 35 | 58 | 40 | 48 | 58 |
Peroxisomes | 1 | 0 | 0 | 1 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 1 | 1 | 2 | 0 | 3 | 1 | 2 | 4 | 2 | 0 | 0 | 1 | 0 | 1 | 4 | 2 | 3 | 1 | 0 | 3 | 1 | 2 | 0 | 2 |
Vac/Vac Membrane | 0 | 2 | 0 | 0 | 1 | 2 | 1 | 4 | 0 | 1 | 0 | 1 | 0 | 2 | 1 | 6 | 4 | 4 | 3 | 8 | 11 | 2 | 4 | 7 |
Unique Cell Count | 71 | 272 | 270 | 216 | 287 | 366 | 558 | 529 | 319 | 383 | 236 | 249 | 80 | 159 | 117 | 204 | 100 | 85 | 76 | 301 | 281 | 99 | 120 | 136 |
Labelled Cell Count | 104 | 350 | 366 | 300 | 378 | 507 | 804 | 704 | 435 | 572 | 330 | 352 | 106 | 207 | 155 | 238 | 116 | 104 | 76 | 301 | 281 | 99 | 120 | 136 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 7.7 | 8.8 | 7.5 | 7.3 | 7.1 | 6.6 | 5.8 | 6.6 | 6.8 | 6.2 | 6.4 | 6.6 | 8.7 | 9.3 | 9.1 | 12.0 | 13.0 | 13.0 | 7.7 | 7.6 | 8.9 |
Std Deviation (1e-4) | 1.9 | 2.2 | 2.5 | 1.9 | 2.3 | 1.9 | 2.0 | 2.4 | 1.9 | 2.0 | 1.8 | 2.2 | 1.4 | 3.0 | 2.9 | 3.5 | 3.8 | 4.3 | 1.8 | 1.6 | 2.0 |
Intensity Change (Log2) | – | – | – | -0.04 | -0.09 | -0.18 | -0.37 | -0.18 | -0.14 | -0.28 | -0.22 | -0.19 | 0.21 | 0.31 | 0.27 | 0.67 | 0.79 | 0.79 | 0.03 | 0.02 | 0.25 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 2.6 | 0 | 2.5 | 3.5 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 0 | 0 | -0.3 | 0 | 0.2 | 0.5 | 0 | 0 | 0 | 0 | 2.1 | 0 | 6.4 | 4.7 | 0 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | -2.0 | 0.5 | 1.9 | 5.4 | 2.7 | 2.4 | 5.2 | 2.5 | 4.7 | -2.3 | -4.0 | -3.3 | -2.3 | -2.4 | -1.0 |
Nucleus | -0.4 | -1.9 | -4.4 | -6.6 | -6.3 | -7.1 | -6.3 | -5.9 | -7.3 | -0.7 | -1.1 | -1.6 | -5.0 | -3.7 | -3.7 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 1.5 | -0.4 | 3.2 | 2.8 | 2.0 | 4.0 | 3.9 | 4.1 | 3.3 | 2.0 | 0.6 | 0.8 | -4.4 | -3.2 | -1.9 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Actin | – | – | – | – | – | – | 0.0175 | 0.0001 | 0.0025 | 0 | 0 | 0 | 0.0432 | 0.001 | 0.0533 | 0.001 | 0.0001 | 0.001 |
Bud | – | – | – | – | – | – | 0.0005 | 0 | 0.0005 | 0 | 0.0001 | 0 | 0.0006 | 0.0001 | 0.0003 | 0 | 0 | 0.0007 |
Bud Neck | – | – | – | – | – | – | 0.0003 | 0.0001 | 0.0002 | 0 | 0.0003 | 0.0002 | 0.0005 | 0.0001 | 0.0003 | 0.0001 | 0.0002 | 0.0011 |
Bud Periphery | – | – | – | – | – | – | 0.0004 | 0 | 0.0005 | 0 | 0.0002 | 0 | 0.0011 | 0.0001 | 0.0003 | 0 | 0.0001 | 0.0017 |
Bud Site | – | – | – | – | – | – | 0.0025 | 0.0003 | 0.0023 | 0 | 0.0001 | 0 | 0.0011 | 0.0004 | 0.0009 | 0.0001 | 0.0001 | 0.0006 |
Cell Periphery | – | – | – | – | – | – | 0.0001 | 0 | 0.0001 | 0 | 0.0001 | 0 | 0.0002 | 0 | 0.0001 | 0 | 0.0001 | 0.0005 |
Cytoplasm | – | – | – | – | – | – | 0.0127 | 0.0001 | 0.002 | 0 | 0 | 0 | 0.0072 | 0.0226 | 0.0034 | 0.0001 | 0 | 0.0004 |
Cytoplasmic Foci | – | – | – | – | – | – | 0.0366 | 0.0008 | 0.0112 | 0 | 0 | 0 | 0.0413 | 0.0059 | 0.0115 | 0.0044 | 0.0024 | 0.0008 |
Eisosomes | – | – | – | – | – | – | 0.0001 | 0 | 0 | 0 | 0 | 0 | 0.0005 | 0 | 0.0003 | 0 | 0 | 0 |
Endoplasmic Reticulum | – | – | – | – | – | – | 0.0088 | 0 | 0.0003 | 0 | 0 | 0 | 0.0176 | 0.0091 | 0.0039 | 0.0001 | 0 | 0.0003 |
Endosome | – | – | – | – | – | – | 0.0674 | 0.0001 | 0.007 | 0 | 0.0001 | 0 | 0.0592 | 0.033 | 0.0258 | 0.0062 | 0.0011 | 0.001 |
Golgi | – | – | – | – | – | – | 0.0186 | 0.0001 | 0.0049 | 0 | 0 | 0 | 0.0155 | 0.0054 | 0.0177 | 0.0041 | 0.0017 | 0.0003 |
Lipid Particles | – | – | – | – | – | – | 0.0052 | 0.0003 | 0.004 | 0 | 0.0001 | 0 | 0.0708 | 0.0005 | 0.0069 | 0.0357 | 0.0646 | 0.0012 |
Mitochondria | – | – | – | – | – | – | 0.0041 | 0.0002 | 0.0018 | 0 | 0.0009 | 0.0001 | 0.0125 | 0.0013 | 0.0123 | 0.0007 | 0.0091 | 0.0088 |
None | – | – | – | – | – | – | 0.0072 | 0.0001 | 0.001 | 0 | 0.0001 | 0 | 0.0357 | 0.0009 | 0.003 | 0.0001 | 0 | 0.0002 |
Nuclear Periphery | – | – | – | – | – | – | 0.0146 | 0.0007 | 0.0093 | 0 | 0.0008 | 0.0001 | 0.0708 | 0.0015 | 0.0018 | 0.0009 | 0.0009 | 0.0015 |
Nucleolus | – | – | – | – | – | – | 0.0288 | 0.0265 | 0.0207 | 0.028 | 0.1827 | 0.1519 | 0.061 | 0.0828 | 0.0203 | 0.0445 | 0.3142 | 0.1573 |
Nucleus | – | – | – | – | – | – | 0.6481 | 0.8762 | 0.8832 | 0.9718 | 0.8126 | 0.8474 | 0.4874 | 0.8322 | 0.8259 | 0.8925 | 0.5987 | 0.8161 |
Peroxisomes | – | – | – | – | – | – | 0.004 | 0.0001 | 0.0041 | 0 | 0 | 0 | 0.0116 | 0.0001 | 0.0073 | 0.0076 | 0.0011 | 0.0003 |
Punctate Nuclear | – | – | – | – | – | – | 0.1197 | 0.0938 | 0.0437 | 0.0001 | 0.0015 | 0.0002 | 0.0549 | 0.0015 | 0.0036 | 0.0019 | 0.0028 | 0.0032 |
Vacuole | – | – | – | – | – | – | 0.0012 | 0.0002 | 0.0004 | 0 | 0.0003 | 0 | 0.0025 | 0.0009 | 0.0005 | 0.0001 | 0.0008 | 0.0023 |
Vacuole Periphery | – | – | – | – | – | – | 0.0015 | 0.0001 | 0.0003 | 0 | 0.0002 | 0 | 0.005 | 0.0006 | 0.0005 | 0.0001 | 0.0018 | 0.0007 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 44.9535 | 33.4881 | 25.3014 | 39.0711 | 33.9991 | 34.7176 | 39.5544 | 43.0053 | 33.1846 | 42.476 |
Translational Efficiency | 1.4413 | 1.883 | 1.9895 | 1.1403 | 1.7047 | 1.9765 | 1.2545 | 1.1391 | 1.4882 | 1.1993 |
Dataset | Hit |
---|---|
Protein Concentration | – |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
---|
Gene | Images |
---|
Gene | Images |
---|