Standard name | |
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Human Ortholog | |
Description | Alanine:glyoxylate aminotransferase (AGT); catalyzes the synthesis of glycine from glyoxylate, which is one of three pathways for glycine biosynthesis in yeast; similar to mammalian and plant alanine:glyoxylate aminotransferases; human homolog AGXT complements yeast null mutant |
ensLOC | DeepLoc | |||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 1 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 3 | 3 | 3 | 5 | 5 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 1 |
Bud Neck | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 2 | 1 | 0 | 1 | 0 | 1 | 0 | 0 | 1 | 0 | 5 | 7 | 3 | 1 | 0 | 0 | 0 | 0 | 1 |
Cytoplasm | 106 | 41 | 97 | 93 | 113 | 51 | 109 | 122 | 58 | 89 | 67 | 82 | 87 | 226 | 169 | 163 | 126 | 74 | 87 | 61 | 68 | 43 | 98 | 135 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 11 | 4 | 0 | 0 | 1 | 0 | 0 | 0 |
Endosome | 0 | 0 | 2 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 4 | 0 | 0 | 3 | 0 | 1 | 1 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 2 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
Mitochondria | 23 | 2 | 5 | 19 | 9 | 17 | 55 | 66 | 51 | 83 | 97 | 120 | 0 | 0 | 1 | 0 | 3 | 3 | 15 | 10 | 23 | 0 | 4 | 5 |
Nucleus | 1 | 0 | 0 | 1 | 2 | 1 | 1 | 2 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 1 |
Nuclear Periphery | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 3 | 4 | 1 | 8 | 7 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 2 |
Vac/Vac Membrane | 0 | 0 | 1 | 0 | 1 | 0 | 1 | 3 | 2 | 1 | 1 | 2 | 0 | 0 | 1 | 3 | 1 | 4 | 2 | 3 | 1 | 0 | 1 | 1 |
Unique Cell Count | 114 | 43 | 104 | 97 | 118 | 61 | 138 | 166 | 99 | 139 | 136 | 166 | 87 | 226 | 174 | 167 | 131 | 82 | 114 | 83 | 109 | 49 | 115 | 159 |
Labelled Cell Count | 130 | 44 | 106 | 113 | 126 | 71 | 172 | 202 | 122 | 180 | 180 | 216 | 88 | 227 | 176 | 174 | 152 | 93 | 114 | 83 | 109 | 49 | 115 | 159 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 2.9 | 3.7 | 3.8 | 4.1 | 4.0 | 3.2 | 2.9 | 3.1 | 2.8 | 2.8 | 2.5 | 2.7 | 5.0 | 5.2 | 5.2 | 5.4 | 5.3 | 4.9 | 4.8 | 6.1 | 5.9 |
Std Deviation (1e-4) | 0.4 | 0.5 | 1.8 | 2.9 | 2.2 | 1.7 | 1.3 | 1.8 | 1.1 | 1.5 | 1.1 | 1.5 | 1.7 | 1.6 | 1.9 | 1.7 | 1.8 | 1.3 | 2.1 | 2.7 | 2.4 |
Intensity Change (Log2) | – | – | – | 0.1 | 0.07 | -0.27 | -0.38 | -0.32 | -0.45 | -0.45 | -0.65 | -0.51 | 0.38 | 0.43 | 0.44 | 0.48 | 0.46 | 0.36 | 0.32 | 0.68 | 0.62 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Actin | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud Neck | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud Site | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cell Periphery | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cyto | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Endoplasmic Reticulum | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Endosome | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Golgi | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Mitochondria | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nuclear Periphery | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nuc | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nucleolus | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Peroxisomes | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
SpindlePole | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Vac | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cortical Patches | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cytoplasm | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nucleus | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Vacuole | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | -1.4527 | -1.577 | -1.8823 | -1.5682 | -1.6908 | -1.6648 | 0.8611 | -0.9206 | -0.4675 | -0.2075 | -0.6316 | -0.8363 | 0.1317 | -1.5644 | -1.2196 | -1.2234 | 0.7673 | -1.0873 |
Actin | 0.0356 | 0.0003 | 0.001 | 0.0027 | 0.0451 | 0.0014 | 0.0989 | 0.0008 | 0.0141 | 0.0139 | 0.0041 | 0.0019 | 0.0879 | 0 | 0.0009 | 0.0624 | 0.0844 | 0.0268 |
Bud | 0.0008 | 0.0003 | 0.0004 | 0.0001 | 0.0002 | 0.0001 | 0.007 | 0.0041 | 0.0025 | 0.003 | 0.0013 | 0.0022 | 0.0108 | 0 | 0.0008 | 0.001 | 0.0073 | 0.0003 |
Bud Neck | 0.0069 | 0.0001 | 0.0002 | 0.0001 | 0.0002 | 0.01 | 0.018 | 0.0003 | 0.0012 | 0.001 | 0.0003 | 0.0008 | 0.0065 | 0 | 0.005 | 0.0219 | 0.0009 | 0.0004 |
Bud Periphery | 0.0008 | 0.0002 | 0.0018 | 0.0001 | 0.0003 | 0.0001 | 0.0138 | 0.0065 | 0.0034 | 0.0116 | 0.0016 | 0.0065 | 0.0495 | 0 | 0.0011 | 0.0011 | 0.02 | 0.0004 |
Bud Site | 0.0045 | 0.0082 | 0.0005 | 0.0001 | 0.0003 | 0.0005 | 0.025 | 0.0128 | 0.0132 | 0.0093 | 0.0065 | 0.0004 | 0.0227 | 0.0002 | 0.0128 | 0.0291 | 0.0051 | 0.0003 |
Cell Periphery | 0.0004 | 0.0002 | 0.0001 | 0 | 0.0001 | 0 | 0.0019 | 0.0004 | 0.0002 | 0.0003 | 0.0001 | 0.0002 | 0.0008 | 0.0001 | 0.0007 | 0.0007 | 0.0006 | 0 |
Cytoplasm | 0.0111 | 0.0114 | 0.0153 | 0.0068 | 0.0265 | 0.0179 | 0.0303 | 0.0352 | 0.031 | 0.0236 | 0.0522 | 0.0577 | 0.0735 | 0.0229 | 0.0214 | 0.0222 | 0.005 | 0.1019 |
Cytoplasmic Foci | 0.0304 | 0.002 | 0.0217 | 0.0084 | 0.009 | 0.0097 | 0.0405 | 0.0091 | 0.0079 | 0.0273 | 0.0252 | 0.0121 | 0.0382 | 0.0024 | 0.0219 | 0.0239 | 0.0044 | 0.03 |
Eisosomes | 0.0006 | 0.0003 | 0.0005 | 0.0003 | 0.0004 | 0.0001 | 0.0013 | 0.0001 | 0.0002 | 0.0002 | 0.0001 | 0.0001 | 0.0024 | 0.0002 | 0.0003 | 0.0012 | 0.0007 | 0.0001 |
Endoplasmic Reticulum | 0.0018 | 0.0003 | 0.0006 | 0.0001 | 0.0004 | 0.0007 | 0.0132 | 0.0005 | 0.0012 | 0.001 | 0.0041 | 0.0008 | 0.0049 | 0.0002 | 0.0011 | 0.0015 | 0.0206 | 0.0006 |
Endosome | 0.0142 | 0.0001 | 0.0025 | 0.0014 | 0.0061 | 0.0028 | 0.0385 | 0.0011 | 0.006 | 0.0323 | 0.0366 | 0.0069 | 0.078 | 0.0012 | 0.0116 | 0.0092 | 0.095 | 0.0041 |
Golgi | 0.0087 | 0.0001 | 0.0003 | 0.0032 | 0.0074 | 0.0008 | 0.0143 | 0.0003 | 0.0028 | 0.01 | 0.0184 | 0.0083 | 0.0125 | 0 | 0.0028 | 0.0085 | 0.0243 | 0.0051 |
Lipid Particles | 0.0322 | 0.0002 | 0.0014 | 0.0137 | 0.0113 | 0.002 | 0.0176 | 0.0005 | 0.0045 | 0.0292 | 0.0185 | 0.0036 | 0.0089 | 0.0002 | 0.007 | 0.0071 | 0.0103 | 0.0047 |
Mitochondria | 0.0066 | 0.0002 | 0.0008 | 0.0037 | 0.0058 | 0.0008 | 0.0222 | 0.0006 | 0.0191 | 0.012 | 0.0183 | 0.0052 | 0.0197 | 0.0006 | 0.003 | 0.0011 | 0.058 | 0.0241 |
None | 0.7715 | 0.9742 | 0.9463 | 0.916 | 0.8598 | 0.9456 | 0.5751 | 0.9222 | 0.8792 | 0.7522 | 0.783 | 0.8808 | 0.4858 | 0.9681 | 0.8761 | 0.7981 | 0.5035 | 0.7763 |
Nuclear Periphery | 0.014 | 0.0001 | 0.0004 | 0.0004 | 0.0004 | 0.0037 | 0.0253 | 0.0003 | 0.0025 | 0.0032 | 0.0069 | 0.001 | 0.0134 | 0.0001 | 0.0018 | 0.001 | 0.1057 | 0.0005 |
Nucleolus | 0.0045 | 0.0003 | 0.0004 | 0.0009 | 0.0001 | 0.0002 | 0.0079 | 0.0005 | 0.0006 | 0.0031 | 0.0005 | 0.0003 | 0.0014 | 0.0001 | 0.002 | 0.0004 | 0.0013 | 0.0003 |
Nucleus | 0.0023 | 0.0006 | 0.0004 | 0.0012 | 0.0002 | 0.0005 | 0.0087 | 0.0011 | 0.002 | 0.0033 | 0.0023 | 0.0016 | 0.0051 | 0.0002 | 0.0046 | 0.0007 | 0.0114 | 0.0008 |
Peroxisomes | 0.0386 | 0.0001 | 0.0031 | 0.0135 | 0.0241 | 0.0005 | 0.0238 | 0.0006 | 0.0038 | 0.0438 | 0.009 | 0.0039 | 0.0459 | 0.0001 | 0.016 | 0.0046 | 0.0031 | 0.0045 |
Punctate Nuclear | 0.0108 | 0.0004 | 0.0014 | 0.0274 | 0.0007 | 0.002 | 0.0061 | 0.0018 | 0.0027 | 0.0069 | 0.0069 | 0.0038 | 0.0159 | 0.0002 | 0.0056 | 0.0033 | 0.0043 | 0.0184 |
Vacuole | 0.002 | 0.0003 | 0.0008 | 0.0001 | 0.0011 | 0.0002 | 0.0068 | 0.0011 | 0.0013 | 0.0097 | 0.0023 | 0.001 | 0.0125 | 0.0024 | 0.0026 | 0.0008 | 0.0125 | 0.0002 |
Vacuole Periphery | 0.0016 | 0 | 0.0001 | 0.0001 | 0.0004 | 0.0003 | 0.0037 | 0.0001 | 0.0005 | 0.0031 | 0.0016 | 0.0009 | 0.0037 | 0.0006 | 0.0012 | 0.0002 | 0.0216 | 0.0002 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 6.67 | 0.8518 | 1.8962 | 2.8678 | 1.8531 | 6.6663 | 4.9522 | 6.6848 | 6.5236 | 3.4448 |
Translational Efficiency | – | – | – | – | – | – | – | – | – | – |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | – |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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