Standard name | |
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Human Ortholog | |
Description | TFIID subunit, involved in RNA pol II transcription initiation; possesses in vitro histone acetyltransferase activity but its role in vivo appears to be minor; involved in promoter binding and G1/S progression; relocalizes to the cytosol in response to hypoxia |
ensLOC | DeepLoc | |||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 1 | 1 | 1 | 3 | 4 | 2 | – | 2 | 3 | 0 | 0 | 3 | 0 | 1 | 1 | 0 | 2 | 1 | 0 | 1 | 3 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 0 | – | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
Bud Site | 0 | 1 | 5 | 0 | 2 | 4 | 6 | 10 | 13 | – | 9 | 12 | 0 | 0 | 2 | 0 | 0 | 3 | – | – | – | – | – | – |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 5 | 4 | 1 | 3 | 6 | 4 | 6 | 19 | 5 | – | 3 | 3 | 26 | 59 | 79 | 36 | 25 | 39 | 0 | 0 | 0 | 0 | 1 | 0 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | – | 1 | 0 | 0 | 2 | 1 | 2 | 3 | 5 | 0 | 0 | 0 | 0 | 2 | 1 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 1 | 2 | 0 | 9 | 11 | 5 | 1 | 1 | 0 | 0 | 3 | 3 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 2 |
Mitochondria | 5 | 35 | 64 | 46 | 80 | 82 | 175 | 206 | 107 | – | 100 | 194 | 7 | 11 | 96 | 29 | 15 | 69 | 1 | 0 | 0 | 0 | 1 | 4 |
Nucleus | 147 | 273 | 104 | 65 | 142 | 136 | 204 | 278 | 113 | – | 98 | 181 | 327 | 359 | 400 | 317 | 206 | 400 | 135 | 251 | 89 | 150 | 271 | 272 |
Nuclear Periphery | 1 | 0 | 0 | 0 | 0 | 1 | 3 | 6 | 4 | – | 2 | 0 | 1 | 1 | 5 | 1 | 2 | 4 | 0 | 0 | 0 | 0 | 0 | 1 |
Nucleolus | 28 | 54 | 20 | 11 | 13 | 19 | 40 | 50 | 27 | – | 30 | 69 | 59 | 34 | 71 | 37 | 30 | 50 | 20 | 29 | 18 | 27 | 50 | 87 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | – | 0 | 0 | 0 | 1 | 3 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 1 | 4 | 1 | 0 | 1 | 0 | 2 | 3 | 1 | – | 3 | 4 | 1 | 5 | 2 | 13 | 9 | 16 | 0 | 1 | 1 | 2 | 5 | 8 |
Vac/Vac Membrane | 0 | 5 | 0 | 0 | 1 | 2 | 0 | 1 | 0 | – | 0 | 1 | 1 | 1 | 3 | 1 | 7 | 11 | 3 | 14 | 2 | 3 | 10 | 12 |
Unique Cell Count | 162 | 301 | 114 | 78 | 159 | 166 | 275 | 374 | 157 | 144 | 268 | 361 | 436 | 526 | 381 | 274 | 493 | 164 | 305 | 118 | 187 | 356 | 403 | |
Labelled Cell Count | 187 | 376 | 195 | 126 | 246 | 250 | 439 | 580 | 273 | 249 | 467 | 423 | 475 | 665 | 446 | 310 | 604 | 164 | 305 | 118 | 187 | 356 | 403 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 6.3 | 5.6 | 4.0 | 4.1 | 4.3 | 3.9 | 3.5 | 3.8 | 3.4 | – | 3.3 | 3.2 | 6.3 | 5.9 | 5.0 | 7.7 | 8.1 | 8.0 | 5.8 | 5.8 | 6.4 |
Std Deviation (1e-4) | 0.9 | 0.9 | 0.7 | 1.0 | 1.1 | 1.2 | 0.9 | 1.3 | 1.0 | – | 0.6 | 0.8 | 1.4 | 1.4 | 1.2 | 1.9 | 2.1 | 1.9 | 1.2 | 1.0 | 1.4 |
Intensity Change (Log2) | – | – | – | 0.04 | 0.08 | -0.04 | -0.19 | -0.08 | -0.25 | – | -0.28 | -0.34 | 0.64 | 0.55 | 0.32 | 0.93 | 1.0 | 0.99 | 0.54 | 0.52 | 0.67 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 2.5 | 3.9 | 4.1 | 3.1 | 3.0 | 2.7 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | -14.1 | -14.9 | -8.5 | -11.6 | -11.3 | -9.8 |
Nucleus | -1.7 | -0.5 | -2.2 | -3.8 | -3.8 | -3.9 | – | -4.5 | -4.9 | -0.2 | -2.3 | -3.6 | -2.1 | -3.6 | -2.6 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | -0.3 | -3.1 | -1.1 | -2.3 | -1.8 | -2.2 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 3.4439 | 3.3474 | 2.9587 | 2.7267 | 2.9707 | 3.089 | 5.2688 | 4.4882 | 4.4866 | 3.7541 | 3.9963 | 3.8904 | 2.9396 | 2.7364 | 2.9761 | 3.2885 | 2.5312 | 2.9217 |
Actin | 0.009 | 0 | 0.0176 | 0.0029 | 0.0559 | 0.0014 | 0.0526 | 0 | 0.0113 | 0.0063 | 0.0024 | 0.0018 | 0.0108 | 0.002 | 0 | 0.0148 | 0 | 0.0001 |
Bud | 0.0003 | 0 | 0.0002 | 0.0001 | 0.0006 | 0 | 0.002 | 0 | 0.0003 | 0.0002 | 0.0002 | 0.0005 | 0.0004 | 0 | 0 | 0.0001 | 0 | 0.0001 |
Bud Neck | 0.0025 | 0.0001 | 0.0002 | 0.0001 | 0.001 | 0.0013 | 0.0053 | 0 | 0.0008 | 0.0004 | 0.0008 | 0.0013 | 0.0021 | 0.0001 | 0.0002 | 0.0002 | 0.0005 | 0.0008 |
Bud Periphery | 0.0008 | 0 | 0.0002 | 0.0001 | 0.0007 | 0.0001 | 0.0066 | 0 | 0.0005 | 0.0003 | 0.0006 | 0.0011 | 0.0005 | 0 | 0 | 0.0002 | 0.0001 | 0.0005 |
Bud Site | 0.0019 | 0 | 0.0013 | 0.0002 | 0.0053 | 0.0001 | 0.0052 | 0 | 0.002 | 0.0019 | 0.001 | 0.0006 | 0.0052 | 0.0002 | 0.0006 | 0.0005 | 0.0001 | 0.0002 |
Cell Periphery | 0.0003 | 0 | 0 | 0 | 0.0002 | 0 | 0.0008 | 0 | 0.0002 | 0.0001 | 0.0002 | 0.0002 | 0.0002 | 0 | 0 | 0 | 0 | 0.0001 |
Cytoplasm | 0.0024 | 0.0001 | 0.0001 | 0.004 | 0.0013 | 0.0001 | 0.0369 | 0 | 0.002 | 0.0008 | 0.0006 | 0.0005 | 0.0117 | 0.0002 | 0.003 | 0.0002 | 0 | 0.0001 |
Cytoplasmic Foci | 0.004 | 0 | 0.0025 | 0.0021 | 0.0034 | 0.0002 | 0.0224 | 0 | 0.009 | 0.004 | 0.0099 | 0.0004 | 0.0021 | 0.0017 | 0.0008 | 0.0026 | 0 | 0 |
Eisosomes | 0.0004 | 0 | 0.0001 | 0 | 0.0002 | 0 | 0.0004 | 0 | 0.0001 | 0.0001 | 0.0001 | 0 | 0.0001 | 0 | 0 | 0.0001 | 0 | 0 |
Endoplasmic Reticulum | 0.0015 | 0 | 0.0001 | 0.0018 | 0.0026 | 0.0001 | 0.0072 | 0 | 0.0019 | 0.0019 | 0.0007 | 0.0016 | 0.0037 | 0 | 0.0001 | 0.0005 | 0 | 0 |
Endosome | 0.0077 | 0 | 0.0012 | 0.008 | 0.0096 | 0.0007 | 0.0351 | 0 | 0.015 | 0.0134 | 0.033 | 0.006 | 0.0064 | 0.0007 | 0.0002 | 0.0042 | 0 | 0.0001 |
Golgi | 0.0026 | 0 | 0.0019 | 0.0006 | 0.0055 | 0.0006 | 0.0098 | 0 | 0.0054 | 0.0041 | 0.0191 | 0.0021 | 0.0018 | 0.0021 | 0 | 0.0042 | 0 | 0 |
Lipid Particles | 0.0115 | 0 | 0.0027 | 0.001 | 0.0037 | 0.0019 | 0.0211 | 0 | 0.0049 | 0.0123 | 0.017 | 0.003 | 0.001 | 0.0082 | 0 | 0.007 | 0 | 0 |
Mitochondria | 0.0111 | 0.0001 | 0.0005 | 0.0004 | 0.0017 | 0.0005 | 0.0244 | 0.0001 | 0.0077 | 0.0038 | 0.0078 | 0.01 | 0.0011 | 0.0007 | 0.0001 | 0.0078 | 0.0003 | 0.0011 |
None | 0.0042 | 0 | 0.0002 | 0.0036 | 0.0012 | 0.0001 | 0.0088 | 0 | 0.0004 | 0.0006 | 0.0002 | 0.0001 | 0.0173 | 0.0001 | 0.0013 | 0.0004 | 0 | 0.0001 |
Nuclear Periphery | 0.0252 | 0.0043 | 0.0003 | 0.0101 | 0.0026 | 0.0005 | 0.0444 | 0.0002 | 0.0063 | 0.0079 | 0.0012 | 0.005 | 0.0117 | 0.0006 | 0.0006 | 0.001 | 0.0007 | 0.0009 |
Nucleolus | 0.0561 | 0.0248 | 0.0174 | 0.0176 | 0.1159 | 0.0904 | 0.0352 | 0.0217 | 0.0186 | 0.024 | 0.1047 | 0.0966 | 0.0392 | 0.0253 | 0.0486 | 0.0083 | 0.1243 | 0.0957 |
Nucleus | 0.8199 | 0.9696 | 0.9464 | 0.9392 | 0.7819 | 0.8999 | 0.6234 | 0.9775 | 0.9029 | 0.9098 | 0.7917 | 0.8644 | 0.87 | 0.9516 | 0.938 | 0.945 | 0.8672 | 0.8983 |
Peroxisomes | 0.0022 | 0 | 0.0065 | 0.0002 | 0.0024 | 0.0005 | 0.0229 | 0 | 0.0034 | 0.0018 | 0.0035 | 0.0004 | 0.0006 | 0.0044 | 0 | 0.0017 | 0 | 0.0001 |
Punctate Nuclear | 0.0329 | 0.0008 | 0.0006 | 0.007 | 0.0033 | 0.0014 | 0.0175 | 0.0004 | 0.0032 | 0.0035 | 0.0018 | 0.0007 | 0.0111 | 0.002 | 0.0062 | 0.0008 | 0.0064 | 0.0013 |
Vacuole | 0.0017 | 0 | 0 | 0.0004 | 0.0005 | 0.0001 | 0.0125 | 0 | 0.0026 | 0.0019 | 0.0026 | 0.0023 | 0.0022 | 0 | 0.0001 | 0.0002 | 0.0001 | 0.0003 |
Vacuole Periphery | 0.0016 | 0 | 0 | 0.0004 | 0.0003 | 0.0001 | 0.0056 | 0 | 0.0013 | 0.0008 | 0.001 | 0.0013 | 0.0006 | 0 | 0 | 0.0003 | 0 | 0.0002 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 15.8565 | 16.948 | 13.9481 | 18.3645 | 18.7709 | 23.427 | 19.395 | 20.9235 | 18.6056 | 19.7191 |
Translational Efficiency | 0.8959 | 0.6587 | 0.9538 | 0.7444 | 0.6306 | 0.5951 | 0.6207 | 0.5309 | 0.6058 | 0.6845 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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