Standard name | |
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Human Ortholog | |
Description | Nucleolar protein; component of the small subunit (SSU) processome containing the U3 snoRNA that is involved in processing of pre-18S rRNA |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 6 | 3 | 2 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 2 | 1 | 1 | 0 | 0 |
Bud Neck | 4 | 7 | 2 | 6 | 3 | 9 | 11 | 10 | 11 | 5 | 10 | 10 | 8 | 5 | 0 | 1 | 1 | 0 | 0 | 1 | 1 | 0 | 0 | 1 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 3 | 7 | 5 | 10 | 6 | 13 | 6 | 0 | 0 | 0 | 0 | 0 | 2 | – | – | – | – | – | – |
Cell Periphery | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 2 | 3 | 5 | 13 | 28 | 12 | 19 | 11 | 5 | 4 | 11 | 10 | 18 | 19 | 31 | 17 | 9 | 10 | 0 | 2 | 1 | 0 | 0 | 0 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | 0 | 4 | 1 | 3 | 14 | 26 | 26 | 7 | 12 | 11 | 3 | 16 | 3 | 8 | 6 | 2 | 3 | 3 | 1 | 2 | 3 | 1 | 3 | 2 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
Mitochondria | 22 | 31 | 1 | 6 | 7 | 21 | 14 | 13 | 22 | 12 | 36 | 26 | 6 | 5 | 0 | 34 | 27 | 27 | 0 | 1 | 2 | 0 | 0 | 0 |
Nucleus | 36 | 52 | 39 | 16 | 16 | 27 | 17 | 25 | 14 | 14 | 18 | 15 | 24 | 6 | 16 | 39 | 33 | 54 | 18 | 35 | 28 | 5 | 9 | 12 |
Nuclear Periphery | 1 | 4 | 0 | 0 | 0 | 0 | 2 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 1 | 0 | 1 | 2 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 249 | 366 | 217 | 223 | 248 | 379 | 338 | 358 | 266 | 232 | 342 | 357 | 270 | 223 | 210 | 266 | 238 | 267 | 225 | 345 | 206 | 88 | 141 | 161 |
Peroxisomes | 0 | 1 | 1 | 3 | 4 | 22 | 12 | 1 | 10 | 6 | 3 | 3 | 3 | 8 | 4 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 11 | 6 | 31 | 32 | 53 | 134 | 131 | 148 | 119 | 121 | 133 | 167 | 26 | 39 | 38 | 6 | 9 | 13 | 16 | 9 | 13 | 5 | 12 | 22 |
Vac/Vac Membrane | 0 | 1 | 0 | 3 | 3 | 1 | 3 | 4 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 6 | 4 | 5 | 1 | 7 | 1 | 1 | 2 | 4 |
Unique Cell Count | 266 | 399 | 241 | 252 | 293 | 425 | 395 | 415 | 320 | 277 | 390 | 402 | 304 | 255 | 256 | 312 | 278 | 314 | 269 | 411 | 264 | 107 | 177 | 211 |
Labelled Cell Count | 326 | 476 | 297 | 305 | 378 | 634 | 580 | 583 | 470 | 417 | 572 | 613 | 358 | 315 | 307 | 374 | 326 | 386 | 269 | 411 | 264 | 107 | 177 | 211 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 17.3 | 21.0 | 16.9 | 16.1 | 13.4 | 10.9 | 10.7 | 10.5 | 9.3 | 9.6 | 8.8 | 8.7 | 18.2 | 17.0 | 15.9 | 24.7 | 25.5 | 25.5 | 13.6 | 17.0 | 17.6 |
Std Deviation (1e-4) | 8.2 | 6.7 | 5.0 | 5.1 | 3.8 | 3.2 | 3.0 | 3.0 | 2.8 | 2.8 | 2.4 | 2.5 | 7.6 | 7.3 | 6.7 | 12.2 | 12.7 | 14.0 | 4.1 | 4.6 | 5.6 |
Intensity Change (Log2) | – | – | – | -0.07 | -0.33 | -0.63 | -0.66 | -0.68 | -0.86 | -0.82 | -0.94 | -0.95 | 0.1 | 0.0 | -0.09 | 0.55 | 0.59 | 0.59 | -0.31 | 0.01 | 0.06 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 2.0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 1.8 | 3.6 | 0.6 | 1.8 | 0.5 | 0 | 0 | 0.6 | 0.3 | 2.2 | 2.8 | 4.3 | 2.0 | 0.8 | 0.8 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | 0 | 3.0 | 3.6 | 3.7 | 0 | 2.6 | 2.7 | 0 | 2.7 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 0 | 0 | 3.1 | 2.5 | 2.3 | 3.8 | 2.8 | 4.6 | 3.7 | 0 | 0 | 0 | 5.0 | 4.7 | 4.4 |
Nucleus | -3.5 | -4.1 | -4.1 | -5.1 | -4.2 | -4.7 | -4.2 | -4.9 | -5.5 | -3.0 | -5.4 | -3.5 | -1.2 | -1.4 | 0.3 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | -0.6 | -1.9 | -0.3 | -1.6 | -1.4 | -2.3 | -2.1 | -0.9 | -0.5 | -0.5 | -0.9 | -2.6 | -1.7 | -1.5 | -1.8 |
Peroxisomes | 0 | 0 | 3.2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | -0.1 | 1.7 | 5.4 | 5.7 | 6.3 | 6.4 | 7.7 | 5.9 | 7.6 | -1.6 | 0.8 | 0.6 | -5.1 | -4.1 | -3.8 |
Vacuole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 14.7464 | 15.1917 | 14.3246 | 13.6739 | 14.2694 | 13.9047 | 11.5494 | 14.1647 | 12.8557 | 11.164 | 12.3968 | 12.1791 | 13.65 | 17.3718 | 15.356 | 13.7976 | 14.5213 | 14.9692 |
Actin | 0.0019 | 0 | 0 | 0 | 0 | 0 | 0.0048 | 0 | 0.0005 | 0.0001 | 0 | 0.0001 | 0.0193 | 0 | 0.0097 | 0.0001 | 0.0036 | 0 |
Bud | 0.0001 | 0 | 0 | 0 | 0 | 0 | 0.0001 | 0 | 0 | 0 | 0 | 0 | 0.0004 | 0 | 0 | 0 | 0.0002 | 0 |
Bud Neck | 0 | 0.0001 | 0.0001 | 0.0001 | 0.0001 | 0.0001 | 0.0009 | 0.0004 | 0.0001 | 0.0001 | 0.0001 | 0.0001 | 0.0017 | 0.0001 | 0.0001 | 0.0001 | 0.0002 | 0.0001 |
Bud Periphery | 0.0001 | 0 | 0 | 0 | 0 | 0 | 0.0001 | 0.0001 | 0 | 0.0001 | 0 | 0 | 0.0006 | 0 | 0 | 0 | 0.0003 | 0 |
Bud Site | 0.0002 | 0.0001 | 0 | 0 | 0 | 0 | 0.0012 | 0.0002 | 0.0001 | 0.0001 | 0 | 0.0001 | 0.0032 | 0.0001 | 0.0003 | 0.0001 | 0.0006 | 0 |
Cell Periphery | 0 | 0 | 0 | 0 | 0.0002 | 0 | 0.0002 | 0.0002 | 0.0002 | 0.0001 | 0.0001 | 0.0001 | 0.0004 | 0.0001 | 0.0001 | 0.0001 | 0.0001 | 0 |
Cytoplasm | 0 | 0 | 0 | 0 | 0 | 0 | 0.0089 | 0 | 0.0003 | 0.0001 | 0 | 0 | 0.0041 | 0 | 0 | 0.0018 | 0.0005 | 0 |
Cytoplasmic Foci | 0.0002 | 0.0001 | 0.0001 | 0 | 0.001 | 0.0002 | 0.0135 | 0.0001 | 0.0069 | 0.0017 | 0.0001 | 0.0012 | 0.0182 | 0 | 0.0005 | 0.0026 | 0.0053 | 0.0001 |
Eisosomes | 0 | 0 | 0 | 0 | 0 | 0 | 0.0001 | 0 | 0 | 0 | 0 | 0 | 0.0007 | 0 | 0.0001 | 0 | 0.0001 | 0 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 0 | 0.0079 | 0 | 0 | 0.0004 | 0 | 0 | 0.0037 | 0 | 0 | 0.0004 | 0.0008 | 0 |
Endosome | 0.0002 | 0 | 0 | 0 | 0 | 0 | 0.0109 | 0 | 0.0001 | 0.0316 | 0 | 0.0054 | 0.0111 | 0 | 0 | 0.002 | 0.0103 | 0.0001 |
Golgi | 0.0001 | 0 | 0 | 0 | 0 | 0 | 0.0029 | 0 | 0.0001 | 0.0045 | 0 | 0.0028 | 0.0025 | 0 | 0.0001 | 0.0001 | 0.0014 | 0 |
Lipid Particles | 0.0005 | 0 | 0.0001 | 0.0001 | 0.0083 | 0.0006 | 0.0095 | 0.0001 | 0.0019 | 0.0142 | 0.0003 | 0.0049 | 0.0095 | 0 | 0.0002 | 0.001 | 0.0059 | 0.0002 |
Mitochondria | 0.0004 | 0 | 0 | 0 | 0.01 | 0 | 0.0023 | 0.0001 | 0.0003 | 0.0022 | 0.0011 | 0.002 | 0.0057 | 0.0001 | 0.0002 | 0.0004 | 0.0078 | 0.0001 |
None | 0.0001 | 0 | 0 | 0 | 0 | 0 | 0.0055 | 0 | 0.0015 | 0.0002 | 0 | 0 | 0.0091 | 0 | 0 | 0.0029 | 0.0008 | 0.0001 |
Nuclear Periphery | 0.0001 | 0.0002 | 0 | 0 | 0 | 0 | 0.0102 | 0 | 0.0003 | 0.0017 | 0 | 0.0002 | 0.0278 | 0 | 0 | 0.0069 | 0.0074 | 0.0007 |
Nucleolus | 0.9212 | 0.861 | 0.9085 | 0.8981 | 0.9095 | 0.9248 | 0.8383 | 0.9098 | 0.8969 | 0.849 | 0.8821 | 0.9116 | 0.7873 | 0.9086 | 0.906 | 0.8859 | 0.8643 | 0.9384 |
Nucleus | 0.0739 | 0.137 | 0.0902 | 0.1011 | 0.0688 | 0.0704 | 0.0648 | 0.0884 | 0.08 | 0.0883 | 0.1158 | 0.0685 | 0.0554 | 0.0901 | 0.0752 | 0.0834 | 0.0635 | 0.0568 |
Peroxisomes | 0.0004 | 0 | 0 | 0 | 0.0001 | 0 | 0.0065 | 0 | 0.0082 | 0.0007 | 0 | 0.0004 | 0.0032 | 0 | 0.0069 | 0.0001 | 0.0034 | 0 |
Punctate Nuclear | 0.0004 | 0.0013 | 0.0009 | 0.0003 | 0.0011 | 0.0037 | 0.009 | 0.0001 | 0.0019 | 0.0003 | 0.0002 | 0.0018 | 0.0322 | 0.0005 | 0.0001 | 0.0115 | 0.0127 | 0.0032 |
Vacuole | 0.0001 | 0.0001 | 0.0001 | 0.0001 | 0.0002 | 0 | 0.0014 | 0.0006 | 0.0005 | 0.0022 | 0.0001 | 0.0003 | 0.0017 | 0.0002 | 0.0003 | 0.0003 | 0.0059 | 0.0001 |
Vacuole Periphery | 0 | 0 | 0 | 0 | 0.0004 | 0 | 0.0012 | 0.0001 | 0.0002 | 0.0023 | 0.0001 | 0.0003 | 0.0023 | 0.0001 | 0.0001 | 0.0003 | 0.0048 | 0 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 48.5294 | 38.2449 | 49.1344 | 43.4559 | 43.4648 | 28.0804 | 40.1123 | 37.5907 | 32.5339 | 43.25 |
Translational Efficiency | 1.4751 | 1.731 | 1.2606 | 1.1807 | 1.174 | 1.6294 | 1.0701 | 0.7788 | 0.8531 | 1.0607 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
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37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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