Standard name
Human Ortholog
Description Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S21, no bacterial homolog; RPS21B has a paralog, RPS21A, that arose from the whole genome duplication
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Micrographs

ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 0 0 0 0 0 0 – 0 0 0 0.06 0 0 0 0 0 0 0 0 0 0 0 0
Bud 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Neck 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Site 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 – – – – – –
Cell Periphery 0 0 0 0 0 0.05 0.06 – 0 0.08 0.09 0.08 0 0 0 0 0 0 0 0 0 0 0 0
Cytoplasm 0.99 0.99 0.99 0.93 0.93 0.8 0.76 – 0.82 0.7 0.77 0.63 0.95 0.97 0.97 0.99 0.98 1.0 0.95 0.92 0.9 0.84 0.78 0.83
Endoplasmic Reticulum 0 0 0 0.06 0.07 0.12 0.17 – 0.12 0.16 0.09 0.22 0.05 0 0 0.05 0.09 0.11 0 0 0 0.05 0.08 0.09
Endosome 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Golgi 0 0 0 0 0 0 0 – 0 0.1 0.05 0.07 0 0 0 0 0 0 0 0 0 0 0 0
Mitochondria 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nucleus 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nuclear Periphery 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nucleolus 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Peroxisomes 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
SpindlePole 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Vac/Vac Membrane 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 0 0 0 0 5 1 – 4 6 6 9 0 0 0 0 0 0 0 0 0 0 1 1
Bud 0 0 0 0 0 0 1 – 1 1 1 1 0 0 0 0 0 0 0 4 1 2 4 3
Bud Neck 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Site 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 – – – – – –
Cell Periphery 0 2 1 1 2 6 14 – 8 18 13 13 1 0 2 2 1 0 0 0 1 0 0 1
Cytoplasm 167 152 184 124 114 102 168 – 147 148 110 101 139 107 147 79 53 55 154 147 173 108 108 194
Endoplasmic Reticulum 1 3 0 8 8 15 37 – 21 34 13 35 7 2 5 4 5 6 1 0 5 6 11 21
Endosome 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Golgi 0 0 0 0 0 1 4 – 3 22 7 12 1 1 0 0 0 0 0 1 0 0 1 0
Mitochondria 0 0 0 0 0 1 0 – 0 0 1 3 0 0 0 0 0 2 1 0 0 1 3 2
Nucleus 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 1 1 0 1 0 0
Nuclear Periphery 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0
Nucleolus 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Peroxisomes 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
SpindlePole 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Vac/Vac Membrane 0 0 1 0 0 1 2 – 0 0 0 1 0 0 0 0 0 0 0 3 2 2 2 2
Unique Cell Count 168 154 185 133 122 127 220 180 212 142 161 147 110 151 80 54 55 163 161 193 128 139 233
Labelled Cell Count 168 157 186 133 124 131 227 184 229 151 175 148 110 154 85 59 63 163 161 193 128 139 233


Cytoplasm

(Huh et al. Nature 2003 425:686)
Screen WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 AF100 AF140 AF180
Mean Cell GFP Intensity (1e-4) 182.2 128.3 152.5 138.7 110.8 67.9 78.7 – 67.2 65.6 62.8 60.2 181.3 189.1 175.3 287.8 277.1 285.6 164.7 158.9 184.1
Std Deviation (1e-4) 33.9 38.4 36.3 36.2 28.4 22.2 18.5 – 16.5 14.9 13.7 15.4 41.8 49.7 40.4 79.8 75.1 74.4 56.4 63.0 60.6
Intensity Change (Log2) – – – -0.14 -0.46 -1.17 -0.95 – -1.18 -1.22 -1.28 -1.34 0.25 0.31 0.2 0.92 0.86 0.91 0.11 0.06 0.27


Localization RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3
Cortical Patches 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0
Bud 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0
Bud Neck 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0
Bud Site 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0
Cell Periphery 0 0 0 3.1 – 0 3.7 3.8 3.5 0 0 0 0 0 0
Cytoplasm -3.1 -3.1 -6.0 -6.9 – -5.8 -8.0 -6.5 -8.9 -2.7 -1.6 -1.6 -0.6 -0.9 0.5
Endoplasmic Reticulum 0 0 4.8 5.9 – 4.8 5.7 4.2 6.7 0 0 0 0 0 0
Endosome 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0
Golgi 0 0 0 0 – 0 4.5 0 3.8 0 0 0 0 0 0
Mitochondria 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0
Nucleus 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0
Nuclear Periphery 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0
Nucleolus 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0
Peroxisomes 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0
SpindlePole 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0
Vacuole 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0

Images

Circle plot not available

Protein Concentration and Protein Localization Data

R1 R2 R3
G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase
Concentration 115.4157 178.8662 151.4226 162.3009 104.41 145.7748 146.1355 202.0737 187.8274 153.3877 171.08 188.2765 147.591 203.9021 177.0178 187.3589 174.6946 161.9044
Actin 0.0154 0.0002 0.0219 0.0007 0.0409 0.0032 0.0003 0.0001 0.0012 0.0042 0.0014 0.0001 0.0124 0.0001 0.0039 0.0004 0.0005 0.0021
Bud 0.0045 0.0004 0.0035 0.0013 0.0032 0.0007 0.0046 0.0002 0.0003 0.0021 0.0029 0.0001 0.0024 0.0002 0.0038 0.0011 0.0012 0.0013
Bud Neck 0.0015 0.0005 0.0013 0.0016 0.0039 0.0028 0.0004 0.0004 0.0005 0.0005 0.0009 0.0011 0.0011 0.0002 0.0006 0.0008 0.0015 0.01
Bud Periphery 0.0039 0.0002 0.0022 0.0005 0.0026 0.0007 0.0033 0.0001 0.0002 0.0011 0.0044 0.0001 0.0036 0.0001 0.0053 0.0005 0.0011 0.0004
Bud Site 0.0051 0.0007 0.006 0.0009 0.0125 0.0003 0.0059 0.0002 0.0007 0.0006 0.0013 0 0.0014 0.0002 0.0018 0.0002 0.0005 0.0003
Cell Periphery 0.0371 0.0216 0.0444 0.0212 0.0206 0.0103 0.0307 0.0138 0.0146 0.0188 0.0188 0.006 0.0304 0.0043 0.0098 0.0149 0.0156 0.0082
Cytoplasm 0.6075 0.9272 0.6834 0.7386 0.5256 0.91 0.7627 0.9475 0.8932 0.7221 0.75 0.9192 0.7099 0.9765 0.8539 0.8631 0.8534 0.7965
Cytoplasmic Foci 0.0388 0.0004 0.0156 0.0007 0.0287 0.003 0.0159 0.0003 0.0032 0.0379 0.014 0.0045 0.0295 0.0003 0.007 0.0016 0.0179 0.0037
Eisosomes 0.0009 0 0.0002 0 0.0013 0.0001 0.0004 0 0.0007 0.0003 0 0 0.0003 0 0.0004 0.0001 0.0012 0.0002
Endoplasmic Reticulum 0.0183 0.001 0.0028 0.0009 0.0054 0.0188 0.0118 0.0057 0.0125 0.002 0.009 0.0349 0.0216 0.0025 0.0034 0.0009 0.0021 0.0384
Endosome 0.0231 0.0004 0.0108 0.0014 0.0171 0.005 0.0011 0.0003 0.0051 0.0025 0.0206 0.0016 0.0149 0.0004 0.0054 0.0014 0.0039 0.013
Golgi 0.0064 0 0.0074 0.0001 0.012 0.0053 0.0002 0.0001 0.0026 0.0017 0.0014 0.0003 0.0053 0 0.0009 0.0001 0.0007 0.0008
Lipid Particles 0.011 0.0004 0.0038 0.0013 0.0108 0.0009 0.0038 0.0011 0.0022 0.0046 0.0038 0.0015 0.0077 0.0004 0.0016 0.0016 0.0042 0.0032
Mitochondria 0.0076 0.0001 0.0063 0.0006 0.1147 0.0014 0.0051 0 0.0014 0.0097 0.0128 0.0004 0.0077 0.0001 0.0111 0.0008 0.0101 0.0018
None 0.0073 0.0002 0.0062 0.0003 0.0054 0.0021 0.0176 0.0002 0.0016 0.0125 0.0037 0.0004 0.0067 0.0002 0.0055 0.0009 0.0145 0.0469
Nuclear Periphery 0.0248 0.0027 0.0094 0.009 0.014 0.0097 0.0102 0.0016 0.0058 0.0042 0.0079 0.0033 0.0213 0.0007 0.0035 0.0049 0.0026 0.0237
Nucleolus 0.014 0.0006 0.0066 0.0028 0.0471 0.0005 0.0172 0.0002 0.0002 0.0064 0.0017 0.0056 0.0074 0.0001 0.0021 0.0018 0.0053 0.0011
Nucleus 0.0166 0.0028 0.011 0.0103 0.0142 0.0079 0.0122 0.0012 0.0032 0.0094 0.0089 0.002 0.0096 0.0011 0.0055 0.0062 0.0034 0.0101
Peroxisomes 0.0047 0 0.0039 0.0001 0.0077 0.0001 0.0004 0 0.0006 0.0136 0.0002 0 0.0024 0 0.0004 0.0001 0.0012 0.0003
Punctate Nuclear 0.0023 0 0.0012 0.0001 0.0025 0.0002 0.0009 0 0.0004 0.0028 0.0108 0.0003 0.0017 0 0.0003 0.0001 0.0003 0.0009
Vacuole 0.1184 0.0375 0.1253 0.154 0.0822 0.0152 0.0874 0.0261 0.0478 0.1312 0.1141 0.0171 0.0833 0.0118 0.0603 0.0836 0.053 0.025
Vacuole Periphery 0.0308 0.0029 0.0266 0.0535 0.0276 0.0019 0.0082 0.0008 0.0019 0.0118 0.0113 0.0015 0.0194 0.0008 0.0136 0.015 0.0059 0.0121

Sequencing Data

R1 R2
G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Post-START S/G2 Metaphase Anaphase Telophase
Gene Expression 1600.7724 1808.3563 2082.1295 1822.4736 1912.9018 1892.2936 1531.8744 1395.9724 1603.7752 1471.895
Translational Efficiency 2.5897 2.4688 2.405 2.7467 2.6974 2.3686 2.5213 2.8182 2.686 2.8435

Hit Data

Dataset Hit
Protein Concentration ✘
Protein Localization ✘
Gene Expression ✘
Translational Efficiency ✘

No result is found for the queried gene(s). Please try another query.


Endocytosis
Temp Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Vph1-GFP)
37℃
RT
Cell Cycle Omics

CYCLoPs (Rps21b-GFP)
Gene / Allele Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Sac6-tdTomato)
Gene Images
Gene Images
Images are not yet available
Images are not yet available