Standard name | |
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Human Ortholog | |
Description | Mitochondrial protein of unknown function involved in lipid homeostasis; associates with mitochondrial ribosome; integral membrane protein that localizes to the mitochondrial inner membrane; involved in mitochondrial morphology; non-essential gene which interacts genetically with MDM10, and other members of the ERMES complex; transcription is periodic during the metabolic cycle; homologous to human aarF domain containing kinase, ADCK1 |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 1 | 2 | 3 | 2 | 0 | 1 | 0 | 2 | 0 | 0 | 1 | 5 | 3 | 4 | 1 | 5 | 1 | 4 | 1 | 1 | 3 | 7 |
Bud | 3 | 7 | 1 | 5 | 0 | 3 | 3 | 7 | 4 | 5 | 8 | 10 | 1 | 3 | 3 | 6 | 6 | 10 | 2 | 1 | 0 | 0 | 0 | 2 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 1 |
Bud Site | 1 | 0 | 0 | 0 | 1 | 0 | 2 | 3 | 3 | 1 | 2 | 0 | 0 | 0 | 0 | 1 | 1 | 2 | – | – | – | – | – | – |
Cell Periphery | 4 | 17 | 4 | 10 | 4 | 2 | 0 | 1 | 0 | 5 | 5 | 1 | 14 | 7 | 7 | 18 | 16 | 12 | 0 | 1 | 0 | 0 | 0 | 0 |
Cytoplasm | 2 | 8 | 3 | 9 | 12 | 14 | 18 | 26 | 16 | 9 | 13 | 14 | 13 | 16 | 25 | 8 | 6 | 10 | 0 | 1 | 0 | 5 | 0 | 1 |
Endoplasmic Reticulum | 3 | 3 | 0 | 1 | 3 | 3 | 1 | 1 | 3 | 1 | 8 | 1 | 4 | 8 | 3 | 6 | 2 | 7 | 0 | 1 | 0 | 0 | 1 | 3 |
Endosome | 2 | 8 | 3 | 8 | 14 | 26 | 28 | 32 | 9 | 13 | 0 | 11 | 11 | 21 | 41 | 11 | 11 | 16 | 11 | 10 | 6 | 8 | 7 | 9 |
Golgi | 3 | 22 | 46 | 40 | 51 | 4 | 4 | 10 | 5 | 7 | 4 | 3 | 75 | 113 | 108 | 59 | 59 | 31 | 9 | 28 | 6 | 16 | 23 | 37 |
Mitochondria | 280 | 253 | 57 | 174 | 119 | 253 | 243 | 356 | 277 | 268 | 357 | 311 | 150 | 160 | 156 | 14 | 11 | 18 | 250 | 244 | 129 | 109 | 158 | 207 |
Nucleus | 1 | 1 | 2 | 2 | 1 | 5 | 14 | 15 | 8 | 7 | 6 | 8 | 1 | 1 | 1 | 4 | 4 | 4 | 0 | 1 | 2 | 1 | 2 | 1 |
Nuclear Periphery | 17 | 10 | 1 | 1 | 4 | 20 | 11 | 32 | 22 | 10 | 23 | 12 | 0 | 2 | 1 | 3 | 2 | 1 | 4 | 2 | 0 | 2 | 1 | 2 |
Nucleolus | 16 | 4 | 0 | 2 | 4 | 18 | 17 | 29 | 15 | 13 | 10 | 16 | 2 | 2 | 2 | 1 | 1 | 3 | 0 | 0 | 0 | 1 | 2 | 1 |
Peroxisomes | 1 | 10 | 4 | 7 | 1 | 4 | 7 | 8 | 2 | 5 | 0 | 3 | 3 | 6 | 27 | 8 | 6 | 12 | 7 | 4 | 5 | 9 | 9 | 9 |
SpindlePole | 1 | 3 | 3 | 4 | 7 | 6 | 9 | 21 | 5 | 8 | 3 | 15 | 1 | 5 | 7 | 7 | 2 | 17 | 1 | 0 | 0 | 0 | 0 | 1 |
Vac/Vac Membrane | 29 | 53 | 37 | 18 | 33 | 56 | 57 | 56 | 33 | 35 | 19 | 31 | 54 | 42 | 57 | 42 | 21 | 34 | 8 | 13 | 3 | 10 | 16 | 28 |
Unique Cell Count | 294 | 299 | 111 | 219 | 199 | 337 | 335 | 497 | 328 | 321 | 386 | 370 | 221 | 277 | 326 | 147 | 122 | 138 | 299 | 319 | 160 | 170 | 232 | 320 |
Labelled Cell Count | 363 | 399 | 162 | 283 | 257 | 416 | 414 | 598 | 402 | 389 | 458 | 436 | 330 | 391 | 441 | 192 | 149 | 182 | 299 | 319 | 160 | 170 | 232 | 320 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 6.1 | 7.5 | 8.4 | 8.0 | 8.4 | 7.2 | 7.2 | 7.4 | 6.3 | 6.6 | 5.9 | 6.2 | 8.4 | 8.4 | 8.1 | 8.4 | 8.3 | 7.5 | 8.1 | 8.4 | 8.9 |
Std Deviation (1e-4) | 0.8 | 1.2 | 1.3 | 1.7 | 1.6 | 1.5 | 1.8 | 1.7 | 1.4 | 1.5 | 1.5 | 1.5 | 1.1 | 1.2 | 1.3 | 1.8 | 1.8 | 1.3 | 1.9 | 1.4 | 1.5 |
Intensity Change (Log2) | – | – | – | -0.07 | -0.0 | -0.22 | -0.22 | -0.19 | -0.42 | -0.34 | -0.51 | -0.43 | 0.0 | 0.0 | -0.05 | 0.01 | -0.01 | -0.15 | -0.05 | 0.0 | 0.09 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.0 | 0 | 0 | 2.5 | 2.6 | 1.6 |
Cytoplasm | 0 | 1.3 | 0 | 1.2 | 1.1 | 0 | 0 | 0 | 0 | 1.3 | 1.3 | 1.8 | 0 | 0 | 1.6 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | 0 | 1.6 | 1.9 | 2.0 | 1.5 | 0 | 0 | 0 | 0 | 0 | 1.8 | 3.0 | 1.7 | 2.0 | 2.6 |
Golgi | -4.5 | -2.9 | -11.7 | -11.6 | -13.0 | -11.3 | -10.9 | -12.5 | -12.4 | -1.3 | -0.1 | -1.6 | -0.2 | 1.1 | -3.2 |
Mitochondria | 5.3 | 1.4 | 4.7 | 4.1 | 4.1 | 7.1 | 6.8 | 10.2 | 7.1 | 2.9 | 1.1 | -0.6 | -7.4 | -7.1 | -6.5 |
Nucleus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 2.2 | 0 | 2.3 | 2.4 | 0 | 2.2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 2.6 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.7 | 0.7 | 0 | 1.6 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2.8 |
Vacuole | -5.8 | -3.4 | -3.8 | -3.7 | -5.8 | -5.8 | -5.5 | -8.3 | -6.6 | -1.7 | -4.0 | -3.5 | -0.8 | -2.8 | -1.5 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 2.7267 | 2.8116 | 3.0177 | 3.0051 | 2.5713 | 3.0606 | 2.7518 | 2.6295 | 2.3566 | 2.1649 | 3.2916 | 2.9821 | 2.7761 | 2.8519 | 2.9088 | 2.8119 | 2.3325 | 2.5124 |
Actin | 0.0017 | 0.0029 | 0.0006 | 0.0007 | 0.0004 | 0.0006 | 0.0149 | 0.0104 | 0.018 | 0.0082 | 0.0708 | 0.0249 | 0.0127 | 0.0171 | 0.0049 | 0.0114 | 0.0023 | 0.0106 |
Bud | 0.0003 | 0.0006 | 0.004 | 0.0003 | 0.0002 | 0.0001 | 0.0008 | 0.0028 | 0.0006 | 0.0008 | 0.0019 | 0.0024 | 0.0013 | 0.0019 | 0.0017 | 0.0005 | 0.0014 | 0.0007 |
Bud Neck | 0.0003 | 0.0002 | 0.0001 | 0.0001 | 0 | 0.0004 | 0.0021 | 0.0014 | 0.0011 | 0.0007 | 0.0028 | 0.0014 | 0.0011 | 0.0018 | 0.0011 | 0.0005 | 0.0002 | 0.0008 |
Bud Periphery | 0.0014 | 0.0014 | 0.0015 | 0.001 | 0.0006 | 0.0005 | 0.0016 | 0.0059 | 0.0009 | 0.0028 | 0.0041 | 0.0078 | 0.0021 | 0.0028 | 0.0028 | 0.0011 | 0.0026 | 0.0026 |
Bud Site | 0.0005 | 0.0013 | 0.0004 | 0.0002 | 0.0002 | 0.0001 | 0.0058 | 0.019 | 0.0055 | 0.0069 | 0.0138 | 0.0015 | 0.0043 | 0.0312 | 0.0168 | 0.0017 | 0.0011 | 0.0009 |
Cell Periphery | 0.0004 | 0.0006 | 0.0002 | 0.0002 | 0.0002 | 0.0002 | 0.0012 | 0.0065 | 0.0006 | 0.0005 | 0.0012 | 0.0005 | 0.0008 | 0.0022 | 0.0011 | 0.0002 | 0.0002 | 0.0012 |
Cytoplasm | 0.001 | 0.001 | 0.001 | 0.0003 | 0.0001 | 0.0003 | 0.0047 | 0.0048 | 0.0149 | 0.0004 | 0.0048 | 0.0141 | 0.0114 | 0.0056 | 0.0089 | 0.0011 | 0.0066 | 0.0007 |
Cytoplasmic Foci | 0.0097 | 0.006 | 0.0037 | 0.0055 | 0.0034 | 0.0025 | 0.0205 | 0.0294 | 0.0202 | 0.0051 | 0.0228 | 0.0134 | 0.0333 | 0.0276 | 0.0131 | 0.0122 | 0.0151 | 0.003 |
Eisosomes | 0.0002 | 0.0002 | 0.0001 | 0.0001 | 0.0001 | 0.0001 | 0.0006 | 0.0022 | 0.0003 | 0.0003 | 0.0007 | 0.0003 | 0.0015 | 0.0003 | 0.0003 | 0.0002 | 0.0001 | 0.0006 |
Endoplasmic Reticulum | 0.0012 | 0.0008 | 0.001 | 0.0001 | 0.0001 | 0.0003 | 0.0145 | 0.0027 | 0.0012 | 0.0006 | 0.0047 | 0.0013 | 0.0052 | 0.0014 | 0.0036 | 0.0003 | 0.002 | 0.0008 |
Endosome | 0.0478 | 0.0418 | 0.0168 | 0.0216 | 0.0136 | 0.0156 | 0.0449 | 0.1049 | 0.0314 | 0.0323 | 0.1464 | 0.0419 | 0.0701 | 0.0639 | 0.0319 | 0.0216 | 0.0468 | 0.0285 |
Golgi | 0.0316 | 0.0355 | 0.0143 | 0.0192 | 0.0223 | 0.0185 | 0.0334 | 0.0655 | 0.0264 | 0.0106 | 0.0443 | 0.0484 | 0.0414 | 0.0405 | 0.0221 | 0.0317 | 0.0126 | 0.0393 |
Lipid Particles | 0.0227 | 0.0175 | 0.0067 | 0.0011 | 0.001 | 0.0123 | 0.0435 | 0.0157 | 0.017 | 0.0293 | 0.0203 | 0.0179 | 0.0382 | 0.0145 | 0.0056 | 0.0119 | 0.012 | 0.005 |
Mitochondria | 0.8306 | 0.8608 | 0.9316 | 0.9103 | 0.9407 | 0.9303 | 0.7449 | 0.6521 | 0.8282 | 0.8602 | 0.5329 | 0.7827 | 0.7234 | 0.7326 | 0.8496 | 0.8825 | 0.8458 | 0.8879 |
None | 0.0007 | 0.0003 | 0.0004 | 0.0001 | 0.0001 | 0.0006 | 0.015 | 0.0029 | 0.0004 | 0.0004 | 0.0031 | 0.0022 | 0.0045 | 0.0039 | 0.0011 | 0.0009 | 0.009 | 0.0003 |
Nuclear Periphery | 0.0017 | 0.0005 | 0.0006 | 0 | 0 | 0.0003 | 0.0121 | 0.002 | 0.0002 | 0.0008 | 0.0459 | 0.0107 | 0.0126 | 0.0015 | 0.0009 | 0.0001 | 0.004 | 0.0014 |
Nucleolus | 0.0026 | 0.0006 | 0.0004 | 0 | 0.0001 | 0.0004 | 0.002 | 0.0022 | 0.0033 | 0.001 | 0.0013 | 0.0006 | 0.0019 | 0.0027 | 0.0007 | 0.0001 | 0.0007 | 0.0002 |
Nucleus | 0.0007 | 0.0004 | 0.001 | 0 | 0.0001 | 0.0004 | 0.0058 | 0.0015 | 0.0006 | 0.0007 | 0.02 | 0.0016 | 0.0019 | 0.0015 | 0.0006 | 0.0001 | 0.0013 | 0.0003 |
Peroxisomes | 0.024 | 0.007 | 0.0103 | 0.0358 | 0.0138 | 0.0105 | 0.012 | 0.0294 | 0.0216 | 0.0049 | 0.0339 | 0.0162 | 0.0154 | 0.0139 | 0.0108 | 0.0166 | 0.0162 | 0.0032 |
Punctate Nuclear | 0.0004 | 0.0001 | 0.0001 | 0 | 0 | 0.0002 | 0.005 | 0.0003 | 0.0006 | 0.0005 | 0.005 | 0.0008 | 0.0014 | 0.0005 | 0.0003 | 0.0002 | 0.0091 | 0.0002 |
Vacuole | 0.009 | 0.0109 | 0.0019 | 0.0011 | 0.0011 | 0.0021 | 0.0089 | 0.0265 | 0.0033 | 0.0122 | 0.0086 | 0.0033 | 0.0091 | 0.0216 | 0.0117 | 0.0021 | 0.0067 | 0.0059 |
Vacuole Periphery | 0.0118 | 0.0097 | 0.0035 | 0.0022 | 0.002 | 0.0038 | 0.0059 | 0.0119 | 0.0034 | 0.0207 | 0.0106 | 0.0061 | 0.0064 | 0.011 | 0.0102 | 0.0029 | 0.0041 | 0.006 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 12.26 | 10.3829 | 15.8372 | 15.0146 | 12.9675 | 18.0574 | 16.9137 | 18.5011 | 19.7258 | 19.6228 |
Translational Efficiency | 0.5618 | 0.7062 | 0.4371 | 0.6015 | 0.4919 | 0.431 | 0.6505 | 0.4234 | 0.4488 | 0.4223 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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