Standard name | |
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Human Ortholog | |
Description | Histone chaperone; involved in regulation of chromatin structure in both transcribed and silenced chromosomal regions; affects transcriptional elongation; has a role in regulation of Ty1 transposition; interacts physically and functionally with Chromatin Assembly Factor-1 (CAF-1) |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | 3 | 8 | 5 | 2 | 4 | 2 | 11 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 1 | 1 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
Bud Site | 0 | 0 | 0 | 1 | 1 | 9 | 10 | 23 | 22 | 34 | 45 | 38 | 1 | 1 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 2 | 5 | 7 | 19 | 10 | 14 | 19 | 15 | 11 | 12 | 6 | 11 | 34 | 47 | 66 | 8 | 21 | 12 | 0 | 0 | 0 | 1 | 1 | 0 |
Endoplasmic Reticulum | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 3 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 2 | 1 | 1 | 0 | 5 | 1 | 1 | 2 | 4 |
Golgi | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 1 |
Mitochondria | 37 | 31 | 22 | 16 | 26 | 146 | 255 | 145 | 153 | 252 | 242 | 306 | 2 | 1 | 2 | 0 | 7 | 7 | 1 | 6 | 0 | 0 | 2 | 4 |
Nucleus | 173 | 442 | 437 | 213 | 255 | 441 | 589 | 509 | 411 | 519 | 374 | 518 | 314 | 284 | 341 | 114 | 177 | 115 | 175 | 447 | 426 | 190 | 220 | 221 |
Nuclear Periphery | 0 | 0 | 4 | 1 | 5 | 5 | 15 | 9 | 11 | 15 | 9 | 5 | 4 | 1 | 4 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 2 |
Nucleolus | 3 | 9 | 10 | 9 | 26 | 67 | 98 | 118 | 83 | 136 | 106 | 126 | 2 | 3 | 3 | 2 | 4 | 2 | 0 | 3 | 3 | 1 | 13 | 15 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 3 | 1 | 2 | 2 | 2 | 2 | 15 | 1 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 3 |
Vac/Vac Membrane | 1 | 3 | 2 | 1 | 0 | 2 | 9 | 3 | 6 | 7 | 3 | 7 | 3 | 7 | 7 | 10 | 2 | 2 | 1 | 11 | 12 | 13 | 37 | 60 |
Unique Cell Count | 184 | 465 | 455 | 237 | 285 | 541 | 728 | 657 | 536 | 683 | 512 | 696 | 353 | 337 | 430 | 134 | 207 | 133 | 182 | 479 | 454 | 213 | 285 | 319 |
Labelled Cell Count | 216 | 490 | 484 | 261 | 323 | 689 | 1004 | 829 | 702 | 981 | 789 | 1026 | 364 | 346 | 443 | 141 | 217 | 141 | 182 | 479 | 454 | 213 | 285 | 319 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 5.6 | 7.3 | 6.5 | 6.5 | 6.3 | 5.0 | 4.9 | 5.1 | 4.9 | 4.6 | 4.2 | 4.1 | 8.5 | 8.0 | 7.6 | 9.4 | 8.4 | 8.8 | 8.3 | 8.9 | 9.1 |
Std Deviation (1e-4) | 1.0 | 1.6 | 1.2 | 2.2 | 1.9 | 1.5 | 1.4 | 1.5 | 1.4 | 1.3 | 1.2 | 1.1 | 3.1 | 1.9 | 1.9 | 2.1 | 2.0 | 2.3 | 1.6 | 1.9 | 1.7 |
Intensity Change (Log2) | – | – | – | 0.0 | -0.05 | -0.37 | -0.42 | -0.37 | -0.41 | -0.51 | -0.63 | -0.66 | 0.38 | 0.29 | 0.21 | 0.53 | 0.36 | 0.43 | 0.34 | 0.44 | 0.48 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 4.0 | 4.4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 4.3 | 1.7 | 1.1 | 1.2 | 0.9 | 0.6 | 0.3 | -0.5 | 0.1 | 5.2 | 6.8 | 7.5 | 0 | 5.1 | 0 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 1.0 | 2.3 | 9.3 | 0 | 7.9 | 9.8 | 0 | 0 | 0 | -3.5 | -3.8 | -4.0 | -2.6 | -0.8 | 0.2 |
Nucleus | -3.2 | -3.5 | -7.1 | -7.5 | -8.5 | -8.6 | -9.0 | -9.7 | -9.5 | -3.9 | -5.7 | -7.6 | -4.5 | -4.8 | -4.1 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0.7 | 1.5 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 1.2 | 4.3 | 6.0 | 0 | 8.1 | 7.1 | 0 | 0 | 0 | -1.9 | -1.4 | -1.9 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 4.0 | 0 | 0 | 0 |
Vacuole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 7.515 | 7.7706 | 7.6386 | 6.8685 | 6.3819 | 6.8804 | 5.2228 | 6.3088 | 5.7746 | 5.2373 | 5.5571 | 5.5028 | 6.3504 | 6.7061 | 6.5603 | 6.1105 | 5.6976 | 5.907 |
Actin | 0.0007 | 0 | 0 | 0 | 0.0006 | 0 | 0.02 | 0 | 0.0034 | 0.0013 | 0.0019 | 0.0021 | 0.0076 | 0 | 0.0001 | 0 | 0 | 0.0003 |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | 0.0008 | 0 | 0.0011 | 0.0001 | 0.0016 | 0.0001 | 0.0001 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0.0001 | 0 | 0 | 0 | 0.0001 | 0.0003 | 0.0009 | 0 | 0.0003 | 0.0004 | 0.0009 | 0.0006 | 0.0005 | 0 | 0.0001 | 0 | 0.0003 | 0.0003 |
Bud Periphery | 0.0001 | 0 | 0 | 0 | 0 | 0 | 0.0019 | 0 | 0.0022 | 0.0004 | 0.0051 | 0.0002 | 0.0004 | 0 | 0.0001 | 0 | 0 | 0.0001 |
Bud Site | 0.0001 | 0 | 0 | 0 | 0 | 0 | 0.002 | 0 | 0.001 | 0.0003 | 0.0029 | 0.0002 | 0.0005 | 0 | 0.0001 | 0 | 0.0001 | 0 |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0.0008 | 0 | 0.0003 | 0.0001 | 0.0024 | 0.0001 | 0.0002 | 0 | 0.0001 | 0 | 0 | 0 |
Cytoplasm | 0.0019 | 0.0003 | 0 | 0 | 0 | 0 | 0.0076 | 0 | 0.0007 | 0.0035 | 0.003 | 0.0001 | 0.0002 | 0 | 0.0002 | 0 | 0.0004 | 0 |
Cytoplasmic Foci | 0.009 | 0 | 0 | 0 | 0.0005 | 0 | 0.007 | 0 | 0.0043 | 0.0262 | 0.0039 | 0.0029 | 0.0006 | 0 | 0.0003 | 0 | 0.0001 | 0 |
Eisosomes | 0 | 0 | 0 | 0 | 0 | 0 | 0.0001 | 0 | 0 | 0 | 0.0001 | 0 | 0.0001 | 0 | 0 | 0 | 0 | 0 |
Endoplasmic Reticulum | 0.0014 | 0 | 0 | 0 | 0 | 0 | 0.0028 | 0 | 0.0008 | 0.0025 | 0.003 | 0.0001 | 0.0002 | 0 | 0.0001 | 0 | 0.0001 | 0.0002 |
Endosome | 0.0065 | 0.0002 | 0 | 0 | 0.0001 | 0 | 0.0184 | 0 | 0.0026 | 0.0226 | 0.0346 | 0.002 | 0.0005 | 0 | 0.0002 | 0 | 0.0001 | 0.0005 |
Golgi | 0.0007 | 0 | 0 | 0 | 0.0003 | 0 | 0.0069 | 0 | 0.0029 | 0.0082 | 0.0047 | 0.0033 | 0.0004 | 0 | 0 | 0 | 0 | 0 |
Lipid Particles | 0.0069 | 0 | 0 | 0 | 0.0031 | 0 | 0.0095 | 0 | 0.0019 | 0.0332 | 0.0102 | 0.0027 | 0.0017 | 0 | 0.0008 | 0 | 0.0001 | 0.0001 |
Mitochondria | 0.0005 | 0.0002 | 0.0002 | 0 | 0.0111 | 0.0001 | 0.0134 | 0.0001 | 0.0056 | 0.0041 | 0.0492 | 0.0033 | 0.0015 | 0.0001 | 0.0004 | 0 | 0.0001 | 0.0003 |
None | 0.0191 | 0 | 0 | 0 | 0 | 0 | 0.0042 | 0 | 0.0003 | 0.0007 | 0.0005 | 0.0001 | 0.0002 | 0 | 0.0001 | 0 | 0.0002 | 0.0001 |
Nuclear Periphery | 0.0231 | 0.0049 | 0.0053 | 0.0003 | 0.0022 | 0.0002 | 0.0177 | 0.0006 | 0.0106 | 0.0166 | 0.0078 | 0.0005 | 0.0018 | 0.001 | 0.0019 | 0.0003 | 0.0009 | 0.0036 |
Nucleolus | 0.0118 | 0.0113 | 0.007 | 0.005 | 0.0408 | 0.0389 | 0.0232 | 0.0068 | 0.0095 | 0.0103 | 0.0492 | 0.0418 | 0.0204 | 0.0084 | 0.0161 | 0.0026 | 0.0535 | 0.0259 |
Nucleus | 0.8888 | 0.9726 | 0.9872 | 0.9944 | 0.903 | 0.9601 | 0.823 | 0.9923 | 0.9431 | 0.8534 | 0.7722 | 0.9364 | 0.9594 | 0.9903 | 0.9778 | 0.9971 | 0.9273 | 0.9678 |
Peroxisomes | 0.0004 | 0 | 0 | 0 | 0.037 | 0 | 0.0112 | 0 | 0.0008 | 0.0063 | 0.0024 | 0.002 | 0.0004 | 0 | 0 | 0 | 0 | 0 |
Punctate Nuclear | 0.0277 | 0.0001 | 0.0001 | 0.0003 | 0.0009 | 0.0001 | 0.0161 | 0.0001 | 0.0065 | 0.0062 | 0.0009 | 0.0004 | 0.0017 | 0 | 0.0006 | 0 | 0.0166 | 0.0002 |
Vacuole | 0.0006 | 0.0056 | 0 | 0 | 0 | 0.0001 | 0.0098 | 0 | 0.001 | 0.0022 | 0.0353 | 0.0007 | 0.001 | 0 | 0.0005 | 0 | 0.0001 | 0.0003 |
Vacuole Periphery | 0.0006 | 0.0047 | 0.0001 | 0 | 0.0001 | 0 | 0.003 | 0 | 0.001 | 0.0015 | 0.0082 | 0.0005 | 0.0006 | 0 | 0.0005 | 0 | 0 | 0.0003 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 49.2015 | 20.189 | 28.3571 | 28.1161 | 49.1511 | 34.6638 | 25.8808 | 21.4042 | 26.3268 | 37.1786 |
Translational Efficiency | 0.8857 | 0.9662 | 0.6587 | 0.9365 | 0.7356 | 1.1944 | 0.6987 | 0.8075 | 0.761 | 0.835 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✔ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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