Standard name
Human Ortholog
Description Multistep regulator of cAMP-PKA signaling; inhibits PKA downstream of Gpa2p and Cyr1p, thereby increasing cAMP dependency; promotes ubiquitin-dependent proteolysis of Ira2p; regulated by G-alpha protein Gpa2p; GPB1 has a paralog, GPB2, that arose from the whole genome duplication

Micrographs

ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Neck 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Site 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Cell Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0.05 0.05 0.12 0.19 0.13 0 0 0 0 0 0
Cytoplasm 0.99 1.0 0.99 0.99 0.97 0.91 0.86 0.85 0.76 0.72 0.69 0.97 0.99 0.99 0.97 0.92 0.95 0.96 0.95 0.93 0.85 0.88 0.86
Endoplasmic Reticulum 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Endosome 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Golgi 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Mitochondria 0 0 0 0 0.07 0.2 0.37 0.38 0.45 0.53 0.54 0 0 0 0 0 0 0 0 0 0 0 0
Nucleus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nuclear Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nucleolus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Peroxisomes 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
SpindlePole 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Vac/Vac Membrane 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 2 0 0 0 0 0 0 0 1 0 1 0 1 0 0 0 0 1 0 0 0 3 0
Bud 0 0 0 0 0 5 2 12 6 5 9 2 0 0 0 0 0 1 0 0 0 2 2
Bud Neck 0 0 0 0 0 0 2 1 1 0 1 0 0 0 0 0 0 1 0 0 1 2 3
Bud Site 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0
Cell Periphery 8 0 2 4 3 8 4 2 8 3 11 5 16 18 11 27 10 0 0 1 0 1 1
Cytoplasm 378 78 157 175 263 279 290 378 311 237 271 236 350 331 86 130 72 364 80 147 121 350 299
Endoplasmic Reticulum 1 0 0 1 0 5 2 0 0 0 3 6 4 3 3 2 3 1 1 1 6 10 9
Endosome 0 0 0 0 0 0 0 2 0 0 0 1 0 0 0 1 1 2 1 2 0 2 4
Golgi 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 2 3
Mitochondria 1 0 2 6 18 60 124 168 187 176 211 0 0 0 0 0 2 1 0 0 6 8 6
Nucleus 1 0 0 1 1 1 1 4 4 2 2 1 0 2 0 0 0 0 0 0 0 0 1
Nuclear Periphery 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1
Nucleolus 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1
Peroxisomes 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
SpindlePole 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 1
Vac/Vac Membrane 0 0 0 0 0 0 3 2 5 2 2 0 0 0 0 3 1 0 0 0 3 9 7
Unique Cell Count 381 78 158 176 270 306 336 446 411 330 391 244 353 335 89 141 76 379 85 159 143 400 349
Labelled Cell Count 391 78 161 187 285 358 430 571 523 426 512 251 371 354 100 165 90 379 85 159 143 400 349


Cytoplasm

(Huh et al. Nature 2003 425:686)
Screen WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 AF100 AF140 AF180
Mean Cell GFP Intensity (1e-4) 6.5 6.1 4.9 5.0 4.6 4.1 3.7 3.8 3.6 3.6 3.6 6.7 6.5 6.3 7.4 7.2 7.5 7.7 7.7 7.7
Std Deviation (1e-4) 0.7 0.9 0.9 1.7 1.5 1.4 1.5 1.2 1.1 1.2 1.0 1.5 1.2 1.0 1.1 0.9 1.6 1.7 1.5 1.7
Intensity Change (Log2) 0.05 -0.08 -0.25 -0.4 -0.36 -0.42 -0.42 -0.45 0.46 0.41 0.38 0.6 0.56 0.62 0.66 0.66 0.67


Localization RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3
Cortical Patches 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Neck 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Site 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Cell Periphery 0 0 0 0 0 0 0 0 0 1.9 2.2 0 5.2 0
Cytoplasm 0.1 -1.4 -3.5 -4.6 -5.0 -6.6 -7.2 -7.7 -1.8 -0.3 -0.6 -1.6 -3.2 -2.3
Endoplasmic Reticulum 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Endosome 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Golgi 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Mitochondria 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nucleus 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nuclear Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nucleolus 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Peroxisomes 0 0 0 0 0 0 0 0 0 0 0 0 0 0
SpindlePole 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Vacuole 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Images

Circle plot not available

Protein Concentration and Protein Localization Data

R1 R2 R3
G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase
Concentration 1.9234 2.7898 2.1113 1.768 2.0803 2.3188 3.4431 4.412 4.193 3.5976 3.9196 4.2549 0.8126 1.7669 1.3577 1.2816 1.323 1.5093
Actin 0.0529 0.0054 0.0288 0.0035 0.0571 0.0011 0.0141 0.0023 0.0119 0.0008 0.0087 0.0109 0.0657 0.0129 0.0124 0.0091 0.0539 0.0222
Bud 0.0109 0.0036 0.0004 0.0018 0.0034 0.0001 0.0005 0.0008 0.0012 0.003 0.0196 0.0002 0.001 0.0003 0.0005 0.0006 0.005 0.0002
Bud Neck 0.0041 0.0035 0.001 0.0027 0.003 0.0008 0.0012 0.0005 0.0003 0.0004 0.0011 0.001 0.0071 0.0001 0.0006 0.0011 0.001 0.002
Bud Periphery 0.0036 0.0008 0.0004 0.0024 0.0087 0.0001 0.0006 0.0005 0.002 0.0071 0.0161 0.0003 0.0015 0.0003 0.0005 0.0005 0.0059 0.0002
Bud Site 0.0035 0.0256 0.0074 0.0146 0.0219 0.0001 0.0058 0.0228 0.0018 0.0006 0.002 0.0007 0.0036 0.0015 0.0063 0.0149 0.0023 0.0002
Cell Periphery 0.001 0.001 0.0005 0.0009 0.0019 0.0003 0.0014 0.0007 0.0007 0.0004 0.0009 0.0004 0.0008 0.0005 0.0005 0.0004 0.0003 0.0001
Cytoplasm 0.6053 0.7001 0.7551 0.7331 0.3239 0.7934 0.7408 0.8538 0.8053 0.8636 0.6836 0.8013 0.6205 0.8117 0.7599 0.7496 0.6429 0.7911
Cytoplasmic Foci 0.024 0.0478 0.0328 0.0428 0.0583 0.0291 0.0216 0.0059 0.004 0.0073 0.0222 0.007 0.0386 0.0039 0.0225 0.054 0.0407 0.0176
Eisosomes 0.0011 0.0001 0.0002 0.0001 0.0023 0 0.0002 0 0.0001 0 0.0004 0.0001 0.001 0.0001 0.0002 0.0001 0.0003 0.0001
Endoplasmic Reticulum 0.0047 0.0043 0.0049 0.0033 0.0126 0.0112 0.0075 0.0019 0.0023 0.0058 0.0029 0.0019 0.0057 0.0061 0.003 0.0059 0.0048 0.0031
Endosome 0.0281 0.0419 0.0265 0.0753 0.082 0.0096 0.0095 0.0019 0.0014 0.0067 0.0317 0.0045 0.0251 0.0011 0.0106 0.0283 0.0342 0.0122
Golgi 0.0099 0.0038 0.0041 0.0017 0.0148 0.0027 0.0046 0.0006 0.0006 0.0006 0.0106 0.0041 0.0125 0.0002 0.0073 0.0286 0.0111 0.0052
Lipid Particles 0.0146 0.0025 0.0034 0.0006 0.0372 0.0023 0.0042 0.0001 0.0003 0.0002 0.0033 0.0011 0.0185 0.0002 0.0081 0.0304 0.0211 0.0034
Mitochondria 0.0166 0.0006 0.0008 0.0003 0.0314 0.0002 0.0026 0.0001 0.0004 0.0006 0.0041 0.0008 0.0121 0.0001 0.0104 0.0114 0.0191 0.0019
None 0.1919 0.1476 0.1261 0.1086 0.2408 0.1462 0.1619 0.1058 0.1642 0.0961 0.157 0.1604 0.1547 0.1588 0.1432 0.0128 0.1095 0.1366
Nuclear Periphery 0.0036 0.0005 0.001 0.0006 0.0264 0.0003 0.003 0.0002 0.0005 0.0014 0.0013 0.0005 0.0034 0.0004 0.0009 0.0007 0.0153 0.0008
Nucleolus 0.0035 0.0002 0.0001 0.0001 0.0089 0 0.0002 0 0.0002 0.0001 0.0002 0 0.0003 0 0.0001 0.0001 0.0009 0
Nucleus 0.0029 0.0009 0.0005 0.001 0.0076 0.0005 0.0012 0.0005 0.0007 0.001 0.0007 0.0004 0.001 0.0004 0.0006 0.0005 0.0028 0.0004
Peroxisomes 0.006 0.0047 0.0016 0.0011 0.0236 0.0004 0.0138 0 0.0002 0.0001 0.0299 0.0009 0.0153 0 0.0083 0.047 0.0168 0.0016
Punctate Nuclear 0.0035 0.0005 0.0007 0.0006 0.0152 0.0006 0.0018 0.0001 0.001 0.0003 0.001 0.003 0.0043 0.0002 0.0023 0.0019 0.0067 0.0005
Vacuole 0.0073 0.0039 0.0029 0.0045 0.0106 0.0008 0.003 0.0012 0.0009 0.0035 0.0019 0.0005 0.0061 0.0011 0.0014 0.0017 0.0025 0.0005
Vacuole Periphery 0.0011 0.0005 0.0005 0.0006 0.0083 0.0001 0.0006 0.0001 0.0001 0.0005 0.0007 0.0001 0.0013 0.0001 0.0004 0.0003 0.0029 0.0002

Sequencing Data

R1 R2
G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Post-START S/G2 Metaphase Anaphase Telophase
Gene Expression 11.673 14.2794 10.8676 18.6745 13.2759 11.0525 16.1963 18.2399 17.8031 19.2275
Translational Efficiency 0.4805 0.4438 0.6188 0.3443 0.4103 0.5015 0.4563 0.3091 0.4 0.3908

Hit Data

Dataset Hit
Protein Concentration
Protein Localization
Gene Expression
Translational Efficiency

Micrographs

Cell Count

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
2460 1497 2231 1520 1870 901 2059 1112 4330 2398 4290 2632

Protein Abundance

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
Mean 786.93 875.15 935.84 939.22 770.25 835.22 963.54 966.43 779.73 860.15 949.13 950.72
Standard Deviation 116.92 124.35 103.47 130.21 98.27 109.97 109.36 122.80 109.57 120.71 107.23 127.84
Intensity Change Log 2 0.153295 0.250027 0.255228 0.116829 0.323018 0.327338 0.135373 0.286593 0.291347

Localization Score (DeepLoc)

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
Actin 0.000254 0.000552 0.000120 0.000837 0.000247 0.000818 0.000128 0.000736 0.000251 0.000652 0.000124 0.000794
Bud Neck 0.013648 0.009123 0.002315 0.007481 0.008983 0.016378 0.002860 0.006686 0.011633 0.011849 0.002576 0.007145
Bud Site 0.012112 0.019393 0.010272 0.045203 0.011340 0.028112 0.016489 0.047782 0.011778 0.022669 0.013256 0.046293
Cell Periphery 0.000298 0.000109 0.000065 0.000110 0.000147 0.000150 0.000075 0.000203 0.000233 0.000124 0.000070 0.000149
Cytoplasm 0.595630* 0.627500* 0.806673* 0.508573* 0.593197* 0.550560* 0.763465* 0.540382* 0.594579* 0.598592* 0.785935* 0.522012*
Cytoplasmic Foci 0.195147* 0.178247 0.029609 0.040612 0.217307* 0.214394* 0.027520 0.052779 0.204717* 0.191828* 0.028606 0.045752
Eisosomes 0.000340 0.000075 0.000018 0.000043 0.000177 0.000146 0.000024 0.000048 0.000270 0.000101 0.000021 0.000045
Endoplasmic Reticulum 0.001121 0.000599 0.000260 0.000755 0.001148 0.000420 0.000396 0.000723 0.001133 0.000532 0.000325 0.000741
Endosome 0.011970 0.015704 0.001140 0.013530 0.018368 0.030980 0.001736 0.019101 0.014733 0.021444 0.001426 0.015883
Golgi 0.006696 0.004783 0.000150 0.007139 0.007174 0.007341 0.000346 0.011351 0.006903 0.005744 0.000244 0.008919
Lipid Particles 0.004228 0.001552 0.000343 0.000871 0.004486 0.002036 0.000427 0.000636 0.004340 0.001734 0.000383 0.000772
Mitochondria 0.001974 0.001353 0.000160 0.003449 0.001543 0.002230 0.000571 0.014712 0.001788 0.001683 0.000357 0.008208
Mitotic Spindle 0.000958 0.004182 0.002972 0.056451 0.000884 0.004285 0.004582 0.043839 0.000926 0.004221 0.003745 0.051123
None 0.004841 0.000766 0.001873 0.002490 0.001659 0.000875 0.002384 0.005056 0.003467 0.000807 0.002118 0.003574
Nuclear Periphery 0.000094 0.000072 0.000137 0.000953 0.000178 0.000052 0.000272 0.000259 0.000130 0.000065 0.000202 0.000660
Nuclear Periphery Foci 0.000514 0.000447 0.000620 0.002779 0.000724 0.000413 0.001093 0.000993 0.000605 0.000434 0.000847 0.002025
Nucleolus 0.000666 0.000415 0.000084 0.000727 0.000426 0.000186 0.000093 0.000259 0.000562 0.000329 0.000088 0.000529
Nucleus 0.056899 0.018970 0.062782 0.035227 0.029528 0.013193 0.058264 0.027737 0.045078 0.016799 0.060614 0.032063
Peroxisomes 0.002191 0.002984 0.000327 0.004971 0.002592 0.005480 0.000261 0.004096 0.002364 0.003922 0.000296 0.004601
Vacuole 0.089387 0.111770 0.079949 0.259252* 0.098559 0.119392 0.118618 0.218015* 0.093348 0.114634 0.098508 0.241829*
Vacuole Periphery 0.001034 0.001403 0.000130 0.008548 0.001333 0.002561 0.000399 0.004607 0.001163 0.001838 0.000259 0.006883

Localization Changes (T-score)

R1 R2 R1 & R2
UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14 UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14 UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14
Actin -1.15 4.11 -2.89 0.06 -4.28 -1.97 3.96 -3.28 1.15 -4.78 -2.07 5.56 -4.11 0.71 -6.05
Bud Neck 5.48 17.34 11.67 6.07 -4.53 -5.24 9.38 4.72 8.01 -3.05 -0.09 19.09 11.92 9.92 -5.18
Bud Site -4.76 2.89 -4.70 -1.33 -6.39 -7.59 0.81 -5.39 0.66 -5.34 -8.72 2.59 -7.11 -0.65 -8.20
Cell Periphery 11.76 15.79 15.00 4.53 -1.79 -0.59 12.89 1.42 1.54 -1.34 8.92 18.78 9.69 2.75 -1.71
Cytoplasm -3.77 -23.65 17.80 18.56 34.30 4.24 -9.65 11.95 6.53 18.86 -0.35 -22.84 21.25 18.54 37.34
Cytoplasmic Foci 3.15 45.84 45.38 31.70 1.57 0.56 46.01 39.41 27.09 -7.36 3.10 64.92 59.99 41.31 -3.85
Eisosomes 16.61 20.42 19.18 8.52 -12.13 1.98 16.51 14.32 7.00 -8.50 14.99 25.08 23.16 9.84 -14.16
Endoplasmic Reticulum 1.73 2.81 1.72 -0.37 -7.37 2.77 2.26 2.08 -1.71 -0.28 2.88 3.55 2.62 -0.97 -3.82
Endosome -3.20 22.29 6.01 7.16 -6.49 -5.72 17.29 6.55 9.93 -6.15 -5.95 26.56 8.90 11.88 -8.89
Golgi 3.61 16.75 6.22 3.48 -3.20 -0.05 16.66 3.05 2.20 -3.76 2.21 23.43 6.49 3.73 -4.92
Lipid Particles 9.85 15.39 13.14 4.07 -11.19 5.98 13.89 13.04 4.01 -4.83 11.42 20.70 18.46 5.70 -11.58
Mitochondria 1.48 5.48 1.71 0.33 -3.13 -0.94 2.85 -2.23 -1.75 -3.07 0.36 5.85 -1.42 -1.59 -3.81
Mitotic Spindle -2.55 -2.35 -9.56 -8.15 -8.89 -2.34 -3.39 -6.94 -5.44 -5.89 -3.44 -4.06 -11.80 -9.78 -10.63
None 6.87 5.16 4.09 -5.19 -1.68 1.37 -2.54 -1.46 -2.14 -0.47 6.59 4.07 2.37 -4.32 -1.24
Nuclear Periphery 1.58 -11.03 -7.94 -8.10 -6.85 1.19 -3.29 -3.29 -20.22 -0.11 1.39 -5.26 -8.42 -10.68 -6.53
Nuclear Periphery Foci 1.23 -4.49 -3.53 -3.70 -2.81 1.67 -2.27 -2.48 -7.33 -0.45 1.97 -3.80 -4.22 -5.39 -2.69
Nucleolus 1.40 6.83 1.66 -0.14 -3.56 5.83 8.58 0.66 -1.84 -2.67 2.12 9.17 1.75 -0.66 -4.43
Nucleus 23.71 -8.84 2.28 -16.51 9.97 13.37 -23.03 -4.11 -11.48 14.47 26.39 -20.17 -0.61 -19.78 16.81
Peroxisomes -3.06 12.25 -0.65 0.92 -4.69 -4.31 10.58 0.11 3.65 -4.69 -5.15 16.27 -0.43 3.16 -6.60
Vacuole -6.20 -7.81 -37.47 -32.77 -31.97 -4.42 -17.94 -29.19 -24.29 -16.93 -7.42 -18.84 -47.42 -40.84 -34.29
Vacuole Periphery -2.20 8.39 -2.15 -1.64 -3.55 -2.15 7.88 -0.62 1.31 -3.07 -2.82 10.97 -2.20 -0.66 -4.51
Standard name
Human Ortholog
Description Multistep regulator of cAMP-PKA signaling; inhibits PKA downstream of Gpa2p and Cyr1p, thereby increasing cAMP dependency; promotes ubiquitin-dependent proteolysis of Ira2p; regulated by G-alpha protein Gpa2p; GPB1 has a paralog, GPB2, that arose from the whole genome duplication
Localization
Cell Percentages cytoplasm (98%)
Cell Cycle Regulation No
Subcompartmental Group cytoplasm-9

Gpb1

Gpb1


Nearest neighbours ( genes)

correlation threshold

0.6

1.0

0.80


Biological Process (Gene Ontology)

Molecular Function (Gene Ontology)

Cellular Component (Gene Ontology)


Endocytosis
Temp Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Vph1-GFP)
37℃
RT
Cell Cycle Omics

CYCLoPs (Gpb1-GFP)
Gene / Allele Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Sac6-tdTomato)
Gene Images
Gene Images
Images are not yet available
Images are not yet available